Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_01910 |
Symbol | |
ID | 8371703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 192919 |
End bp | 194280 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644990498 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_003148044 |
Protein GI | 256824084 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.960421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.776802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGA CCGAACAGAC CGGCACCCCC CAGGCCCACA CCGACCCGTC AGGTTCCCAG GACGCCCCGC GGTACGCCGT CGCGGTGATC GGTGCCGGGT CGATGGGGGC CGGCATCGCC CAGGTGGCCG CCCAGGCGGG ACACGAGGTG CACCTGGTGG ACGTGCGGGA CGGTGCTGCG GCGCAGGCCG TCGAGAAGCT CGGCGCGACG CTGCGCAAGC TCGCCGGGAA GGGCAAGATC TCCGAGGCCG ACGCCGAGGC TGCCATCGGG CGACTGGTCG TGGGGCCGGC CGCCAACGGG GACCTGGCAG CCCTGCCGGC GATGGGCCTG GTGATCGAGG CCGCCGTCGA GCGCCTCGAC GTGAAGCAGG AGGTCTTCTC CACGCTCGCG GAGCACCAGG GAGCCGACAC GATCCTGGCG AGCAACACCT CGAGCCTGGA CATCGCCGCC ATCGCCGAGG GGGTGGCCGA GCCGGGGCGC GTCATCGGCC TGCACTTCTT CAACCCGCCG CCGCTCATGA AGCTGGTGGA GGTCATCCGG GGTGAGCAGT CCTCCCTCCA GGTGCTGGAC GCCGCGACCG AGCTGATGCG CTCCTGGGGC AAGACGCCGG TGCGCTGCAC GTCCACGCCG GGCTTCATCG TGAACCGGGT GGCCCGGCCG TTCTACGGCG AGGCGCAGCG GATGGCGCAG CGGGGCAGCG CGTCCCCGGC GGACCTCGAC CTCGCACTGA CCGAGTACGG CGGCTTCGCG ATGGGGCCGT TCCGGTTGAC CGACCTCATT GGGCAGGACG TGAACTACGC CGTCGGCCAC AGCGTGTGGC AGCAGACCGA CCAGGACCCG CGCTACGAGC CAACCGGTTT CCAGGACGAC CTCGTGCAGG CCGGCGCCCT GGGCCGCAAG ACGGGCCGCG GCGTCTACAC CTACGACGAC CAGGGGAAGC CGACCGATGC CGAGGGCGAC CCCTTCGCGG CACGGGCGCT GGCCCGGGGG CCGGTCGAGA CGAACGTGGT GGCCCGCACC ATCGCGATGC TGGTGAATGA GGCGGTCGAC CTGGTGCACC GCGGGGAGGC GTCGCGCCGG GACGTGGACA CCGCGATGAA GCTGGGCACG AACTATCCCA AGGGGCCGTT CGAGTGGCTC GAGGAGCTCG GCGCCGAGAA GGTGCTGGCC GACCTGCGGG TCATGGACGC GGCGTACCCG ACCGGGCGGT ACCGGCCGAG TGAGGCGCTC GTGGCGATGG TCGACGCCTC AGAGCGCGGG GCCGGGGATC GCGAGACGGG GGGCCCGGCG GCCGCGGGAC GCGGGGCCGG GGATCGCGAG ACCGGGGGAC ACCACACCGA CGAGGAGAGA GAGCGCGCAT GA
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Protein sequence | MSSTEQTGTP QAHTDPSGSQ DAPRYAVAVI GAGSMGAGIA QVAAQAGHEV HLVDVRDGAA AQAVEKLGAT LRKLAGKGKI SEADAEAAIG RLVVGPAANG DLAALPAMGL VIEAAVERLD VKQEVFSTLA EHQGADTILA SNTSSLDIAA IAEGVAEPGR VIGLHFFNPP PLMKLVEVIR GEQSSLQVLD AATELMRSWG KTPVRCTSTP GFIVNRVARP FYGEAQRMAQ RGSASPADLD LALTEYGGFA MGPFRLTDLI GQDVNYAVGH SVWQQTDQDP RYEPTGFQDD LVQAGALGRK TGRGVYTYDD QGKPTDAEGD PFAARALARG PVETNVVART IAMLVNEAVD LVHRGEASRR DVDTAMKLGT NYPKGPFEWL EELGAEKVLA DLRVMDAAYP TGRYRPSEAL VAMVDASERG AGDRETGGPA AAGRGAGDRE TGGHHTDEER ERA
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