Gene Ksed_01900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01900 
Symbol 
ID8371702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp192323 
End bp192922 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content72% 
IMG OID644990497 
Producthypothetical protein 
Protein accessionYP_003148043 
Protein GI256824083 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC ACGACGGACT GCGGAGCACG GCGAGCGACG GCACGGACCT GGGCCACGTG 
CGGGGCATGT GGGAGGTCGA CGGGGCCTCG CGACACATGG GCATCGAGGT GCTCGACCTG
GACCGCGTGG ACGGACTCGG ACAGTCGGTG GCCAGCATGA CCATCACGGA CACGATGGTG
AACGGCCACG GCACCACCCA CGGCGGCATG GTGTTCACCT TCTGCGACAG CGTCTTCGCC
CTGACCTGCA ACAGCTCCGG TGTGACCACG GTGGCGGCAC ACTGCGACAT CGACTTCCTG
GCCGCCACCC AGCTCGGGGA CGTGCTGGTG GGGGTGGGCA CGGAACGGTT CCGGTGGGGC
CGCAACGGCA TGACCGACGT GGTGGTCCGG CGCGCTCCGC GGGCAGGCGA GCGCCCCGCG
GGGTCGGCGG CCACGGGACA GGGCGCGGCT GACGGGCAGG GCGCGGGCGA CGGGCAGGGC
ACGGCCGACA ATGCGGCGCC CACTCCCCTG CGCGGTGGTG GCCCGGTTCC GACGGACCTC
GAGACCTGGC CGGTCGTCGC GGTCTTCACC GGGCGGAGCA AGGCGCTGCC ACCACGCTGA
 
Protein sequence
MTWHDGLRST ASDGTDLGHV RGMWEVDGAS RHMGIEVLDL DRVDGLGQSV ASMTITDTMV 
NGHGTTHGGM VFTFCDSVFA LTCNSSGVTT VAAHCDIDFL AATQLGDVLV GVGTERFRWG
RNGMTDVVVR RAPRAGERPA GSAATGQGAA DGQGAGDGQG TADNAAPTPL RGGGPVPTDL
ETWPVVAVFT GRSKALPPR