| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_01880 |
|---|
| Symbol | |
|---|
| ID | 8371700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 189535 |
|---|
| End bp | 190596 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644990495 |
|---|
| Product | cytochrome d oxidase cyd, subunit II |
|---|
| Protein accession | YP_003148041 |
|---|
| Protein GI | 256824081 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCT CCATCATCTG GTTCGTCCTG ATCGCCGTCC TGTGGATCGG CTACTTCGTC
CTCGAGGGCT TCGACTACGG CGTGGGCATG CTCGTGCCCG TGCTGGGCCG CGATGCGGAC
CCGGCCGTCG CGGAGCGCAA GCGCCGGCAG GTGCTCAACA CCATCGGCCC GCACTGGGAC
GGCAACGAGG TGTGGCTGCT CACCGCCGGT GGTGCCACCT TCGCGGCCTT CCCGCACTGG
TACGCCACCC TGTTCAGCGG CTTCTACCTG CCGCTGCTGA TCATCCTGGT GGGCCTGATC
CTGCGCGGCA TGGCCATCGA GTACCGCCAC AAGCAGGACG ACGACACCTG GCGCGCCCGC
TGGGACAAGG CCCTCGTGGT GGGCTCGTTC ATCCCGGCCC TGCTGTGGGG TGTGGCGTTC
ACCAACATCG TGGTGGGCGT CCCCATCGAC GCCGACATGG AGTACACCGG CACCCTGTGG
ACGCTGCTGA ACCCGCTGGC GCTGCTGGGC GGCCTGGCCA CGCTCACGGT CTTCCTCACC
CACGGCGCGC TGTTCGTCGC CCTGAAGACG GTCGGCGAGG TGCGCCACCA GGCCCGCGGG
ATCGCCCTCA AGGTGGGCCT CGTGGCCGCC GTGCTGACGC TGGCCTGGAT GGTCTGGGTC
ATGAGCCTGA CCGGCGACAC GTTGAGCTGG GTCCTCGCCG TGGCCGGCGC GCTGGTCTTC
GTGGCCGGCC TGGCGCTGGC CGCCAAGAGC AACGAGAAGG GCGCCTTTTG GTGCAGCTTC
GTGGCCATCG CCCTGGTGGT GACCGCACTG TTCGTCGCCC TGTTCCCCGA CGTCATGCCC
TCCTCCACCA ACGCGGCCTG GTCGCTGACG CACGAGAACG CCTCGTCCTC GCAGTACACG
CTCACGATCA TGACCTGGGT GGCCGTACTG CTGACCCCGG TGGTGCTGGC CTACCAGGCC
TGGACCTACT GGGTGTTCCG CAAGCGGATC AGCACCGACG ACATCCCGGA GCCTGCCCCC
ATCGGCACCG AGGCCACGCG CGAGCTGGCC GAGAAGGGCT GA
|
|---|
| Protein sequence | MELSIIWFVL IAVLWIGYFV LEGFDYGVGM LVPVLGRDAD PAVAERKRRQ VLNTIGPHWD
GNEVWLLTAG GATFAAFPHW YATLFSGFYL PLLIILVGLI LRGMAIEYRH KQDDDTWRAR
WDKALVVGSF IPALLWGVAF TNIVVGVPID ADMEYTGTLW TLLNPLALLG GLATLTVFLT
HGALFVALKT VGEVRHQARG IALKVGLVAA VLTLAWMVWV MSLTGDTLSW VLAVAGALVF
VAGLALAAKS NEKGAFWCSF VAIALVVTAL FVALFPDVMP SSTNAAWSLT HENASSSQYT
LTIMTWVAVL LTPVVLAYQA WTYWVFRKRI STDDIPEPAP IGTEATRELA EKG
|
|---|
| |