Gene Ksed_01680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01680 
Symbol 
ID8371680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp167208 
End bp168200 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID644990475 
Productsphingosine/diacylglycerol kinase-like enzyme 
Protein accessionYP_003148021 
Protein GI256824061 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.633077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA CTGCAGAGGC CACCGGACGC GATGGGGTCG GCCGCCAGCG GGCGGGCTTC 
GTCATCAACC CCATCAAGTT CGACGACGTG GACGACGTCC GCCGCCAGAT GGAGCGGATC
TGCGCCGAGA ACGGGTGGGA CGAGCCGCTC TGGCTCGAGA CCACCGAGGA GGACCCCGGC
GCCGGTCAGG CCCGCGAGGT GCTGGACGCC GGCTGCGACC TGGTGGTCCC CATCGGCGGG
GACGGCACCG TGCGGACCGT GGCCAGCCAG TTGGTGGGGA CCAAGGTGCC GCTCGGCCTG
GTGCCCGGCG GCACGGGCAA CCTGCTGGCC CGCAATCTCG ACCTGCCCGT GACCTCCCGC
GAGGACGCCC TGAACCTCGC CCTCACCGGC GCCGACCGGC GGGTGGACGT GGGCCAGGTG
CGCTACTGGG ACACCGACGG CGAGACCCAC GAGGAGTACT TCCTGGTGAT GGGCGGGGTG
GGCATGGATG CCGACGTCAT GGAGTCCACC GACGACGAGG TGAAGAAGCG CTTCGGCTGG
ATGGCCTACG CACGCTCCGC GGTGCTGCTG GGCTACGACA CCCCGGTGCC CGCCAGCATC
CGCACCGGCG AGGACGAGCC GGTGCACAAG AAGATCCGCA GCGTGCTGTT CGGCAACGTC
GGCAAGCTGC AGGGAGGGGT GGCGGTGCTG CCCGAGGCCC GCATCGACGA CGGACAGCTG
GACACCCTCG TGGTGGCGCC GCGCGGCATC ACCGGGTGGG CCGGGGTCGT GGCCGGCATG
GTCACCCGCG GCTCGGTGGG CGGCGGCAAC GTCTCCTACC ACCAGGGCAC CCAGGTGGAC
GTGCAGCTCG CCACGCCCAC CCGCGCCCAG GTGGACGGCG ACGGCGTCGG CTACGTGACG
CGCATCGCCG GGCGGATCGT GCCCGAGGCG CTGACCGTGC GGGTGCGACC CGAGGGCCAA
CGCGGGGCCC GGCGGGCGGG CTCCGCGGCC TGA
 
Protein sequence
MPTTAEATGR DGVGRQRAGF VINPIKFDDV DDVRRQMERI CAENGWDEPL WLETTEEDPG 
AGQAREVLDA GCDLVVPIGG DGTVRTVASQ LVGTKVPLGL VPGGTGNLLA RNLDLPVTSR
EDALNLALTG ADRRVDVGQV RYWDTDGETH EEYFLVMGGV GMDADVMEST DDEVKKRFGW
MAYARSAVLL GYDTPVPASI RTGEDEPVHK KIRSVLFGNV GKLQGGVAVL PEARIDDGQL
DTLVVAPRGI TGWAGVVAGM VTRGSVGGGN VSYHQGTQVD VQLATPTRAQ VDGDGVGYVT
RIAGRIVPEA LTVRVRPEGQ RGARRAGSAA