| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_01580 |
|---|
| Symbol | |
|---|
| ID | 8371670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 158061 |
|---|
| End bp | 158591 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644990465 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_003148011 |
|---|
| Protein GI | 256824051 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.869565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA GCGGCTCACC CACCGACCTG ATCGCCCAGC GCCTGCAGCG AGAGCTGGCT
GCCGATCGTG CCGACGGGGC GTTGCCCCTG CGCGTTGCGG TGGTCGCTGC CTCTTGGCAC
GACGAGGTGA TGGACGGACT GCTGGCCGGG GCGGAGCGAG CCCTCTCGCA GCTGGGGATC
ACCCCGCGGG TGATCCGCGT GCCCGGGTCC TTCGAGCTGC CGGTCGCCGC CGGCCGGGTG
GCGCGGCACG TGGACGCCGT GGTGGCGCTG GGCGTCGTGA TCCGCGGCGG GACGCCCCAC
TTCGAGTACG TCTGCCAGGC CGCGACGAGC GGGCTGACGG ACGTCTCGGT GCGCACCGGC
ACCCCGGTGG GCTTCGGCGT GCTGACCTGC GACGACGAGC AGCAGGCCCT CGACCGCGCG
GGCCTGGAGG GTTCGCGCGA GGACAAGGGC GCCGAGGCGG CACTGGCGGC GGTGGACACC
GCCGCCACAC TCCGGCGCGC CAAGGGGACC TGGCGGTCCG ACGCCCGGTG A
|
|---|
| Protein sequence | MSASGSPTDL IAQRLQRELA ADRADGALPL RVAVVAASWH DEVMDGLLAG AERALSQLGI
TPRVIRVPGS FELPVAAGRV ARHVDAVVAL GVVIRGGTPH FEYVCQAATS GLTDVSVRTG
TPVGFGVLTC DDEQQALDRA GLEGSREDKG AEAALAAVDT AATLRRAKGT WRSDAR
|
|---|
| |