Gene Ksed_01290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01290 
Symbol 
ID8371642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp134726 
End bp136471 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content71% 
IMG OID644990439 
ProductABC-type multidrug transport system, ATPase and permease component 
Protein accessionYP_003147985 
Protein GI256824025 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCC TCCGTGACTC CCTGCTGCCC GTCGCCTCGC CTCGCACCGT CCGACGAGCC 
GGCGCAGCCG TTCTGGGGCG GGAAAGGTGC ACGGTCCTCC TCATCTGCGT GCTGTACCTG
TCCGCGGCAG CCGCCGGGGT CGCCCTCCCG GTGGGGTTGG GGAAGGTGGT GGACGGCGTC
CGGGAGGGCT GGACGACACA ACAGGTGGAC ACCACCTGCG CTGCCCTCCT GGGATGCGTT
GCGCTCCAGC TGCTGCTGAC ACGCGCCGGC CGGTGGACCG CCCACCGCTT CGGTGACCGT
GCATCGGCCG CGATACGTGA GCAGGCGATG GCCAGGGTGC TGCGGCTACC GATGAGAACC
ATCGAGCGGG CGGGGACAGG CGATCTGGCC ACCCGCGTCA CCGGGGACGT CGACGTCGTC
GCCACGATGT TCCGTACGAC GGGTCCCGAG ATGGCGGCGG CCGCGCTCGA GGTGGGTGTC
GTGGTGGGAG CGGCGTTCCT GGTCGACCCC TTGCTGGCAC TCCTGCTGGC CGTCGTGCTG
CCCCCGCTGG TGGTGGCCGG GCGCACCTAC ACCCGTCGAG CCCGCCCTGT GCTGATGTCC
GAGCGGGCGG CTCTGGGCGA CCTGTCCACA TCCCTGACGG CCACCGCAGT CGGACGGCGG
ACGGTCGAGG CGCACGGCCT CGGGGCGAAC CGTGCTGCCC AGGGCCGTGA CCTGGCCGGA
CGCCGACGGG CGATGCAGCA CCAGGTCCTG AACCTGCGGT GCTGGTTCCT GCCCACGCTC
GACCTCGCGT ACACCCTGCC AGTGTTCGCC ATCCTGTGCG GTGGGGGCCT GATGGCCCTT
GCCGGGGGCG TCAGCACAGG CTCGGTCGTG GCGTGCACGA TGCTGGCCTA CCGCCTCTCC
GGCCCCCTCG ACCGCATCAT GTACTCCCTG ACCGAGCTCG AGGAGTCTAT GGCGGCCCTG
TCTAGAGTCG AGGGCCTGGG CCTCCTCCGC CCGGACCCCC GGACCCGACG ACCCCGTGGC
AGCGGAGTCG AGCTGCAGGA CGTGGTCTTT AGCTACGACG ACCACCAACA GGTCCTTCGC
GGCCTGAGCC TTGCTGTCGC TCCGGGAGAG CACCTGGCCG TCGTCGGTCC GTCGGGAGCC
GGGAAGTCCA CGGTGGCCTG GCTCGTCGCC GGGATCGAGC GTCCGCGGTC CGGCCACGTG
CTCGTCGGAG GGGCGCCCAC CGCGGAGATC GACGCAGAGG TCATGCGGCG CACCGTGATG
CTGCTGAGCC AGGAGCAGCA CGTCTTCGCC GCCACGGTGA GGGACAACCT CACACTGGCA
CGGCGCGGCG CTGACGACGC CACGCTGCTG GATGCCCTGC ACCGGGTGGG TGGCGCCTGG
GTCGCAGACC TGCCCGACGG TCTCGACACG CTCGTGGGCG AGGGAAACCA CGTCCTGTCG
ACCTCGCAGA GCCAGCAGAT TGCCCTCGCA CGCGTGCTGC TGGCCGACCC GGCCGTGGTC
ATCCTGGACG AGGCCACCGC CGGATCCGGC CCCCGCAGAT CCGGGCATGA AGAGGTGAGC
GTGGCGTCGG TACTGGCGGG GCGGACACGC ATCACCATCA CGCACCAGCT TGCCGCTGCC
CTGACAGCCG ATCGGGTCGC CGTCATCGAG GAGGGCCGTA TCTCCGAGGT CGGACCTCCA
GCGGAGCTTC TCGCGCGCGA GGGCAGCCTC TCGCGCCTGT GGCAGATGGC TGGCGGGATC
GTCTAG
 
Protein sequence
MNVLRDSLLP VASPRTVRRA GAAVLGRERC TVLLICVLYL SAAAAGVALP VGLGKVVDGV 
REGWTTQQVD TTCAALLGCV ALQLLLTRAG RWTAHRFGDR ASAAIREQAM ARVLRLPMRT
IERAGTGDLA TRVTGDVDVV ATMFRTTGPE MAAAALEVGV VVGAAFLVDP LLALLLAVVL
PPLVVAGRTY TRRARPVLMS ERAALGDLST SLTATAVGRR TVEAHGLGAN RAAQGRDLAG
RRRAMQHQVL NLRCWFLPTL DLAYTLPVFA ILCGGGLMAL AGGVSTGSVV ACTMLAYRLS
GPLDRIMYSL TELEESMAAL SRVEGLGLLR PDPRTRRPRG SGVELQDVVF SYDDHQQVLR
GLSLAVAPGE HLAVVGPSGA GKSTVAWLVA GIERPRSGHV LVGGAPTAEI DAEVMRRTVM
LLSQEQHVFA ATVRDNLTLA RRGADDATLL DALHRVGGAW VADLPDGLDT LVGEGNHVLS
TSQSQQIALA RVLLADPAVV ILDEATAGSG PRRSGHEEVS VASVLAGRTR ITITHQLAAA
LTADRVAVIE EGRISEVGPP AELLAREGSL SRLWQMAGGI V