Gene Ksed_00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00880 
Symbol 
ID8371601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp94172 
End bp95548 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID644990401 
Productsugar phosphate permease 
Protein accessionYP_003147947 
Protein GI256823987 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGGC TCGCGCTCGC GACGATCGGC CTGGCCCAGT TCGCCGTCGC GATGGACTTC 
TCCATCGTCT ACGTCGCGAT GCCCACGATC GGTGCCGACC TGGGCATGGA CCCCGCGACG
TTGCAGTGGC TCATCACCGC CTACTCGCTC CCGTTCGCGG GCTTCCTGCT GTTCGGTGGC
AAGGTCGTCG ATCGAGTCGG TGCTCTCCGT GTCTTCGTCG CCGGGATCGC GGTCTTCGGC
GCGGCCAGCG TCCTCGCGGG TGTTGCGAAC GCCGATTGGC TGGTCATCCT CGGCCGGGCG
CTCCAAGGGC TCGCAGGAGC GTTCCTCTCG CCAGCGATCC TCGCGCTGCT CTCGGTCAAC
TTCCCGACAG GGCCGGTACG TGCCCGCGCC TACTCCATCT GGGGTGCCGT GGGCGCTTCG
GGGCTTGCGG CCGGGGTTGT GTTCGGCGGC CTGTTCACCG AGGTGAGCTG GCGACTCATC
TTCCTGGTCA ACATCCCCAT CGTGCTCATC TGCATCTGGG GCACCCGGAA GATGACCGAC
ACCATCAAGG TCGACGCGGC CCGCTCCCGC ATACCCACCG TCTCCACGAT CCTCGGCACC
GCCGCGATCC TGCTCGTTGT CCTCACTCTC ACCCTCTTCG GAGAGACCGG CGCCGACCCG
CTCCAACTCG GCATCGTCGG CGCGGTCGCA CTCCTCACCC TGATCGTGTT CCTCACCAAT
GAGCACCATT CTCAGACGCC ACTGATCGAC CGGCCGCTGC GCAAGATCAA GAACCTACGT
CGCGGGGCGC TCGCCGCCGC CCTGTACATG TCGAGCGTGG GTACGGAGTT CTTCATCGTC
ACACTGTTCC TGCAAGACCA GCGCGGCTTC TCACCGCTGA CGGCCGGGAT CGCGTTCCTG
CCCCTGGCTG CGCTCGTCAC GGTCGGCAAC ATCTGGGCCG GACGACTCTT GAAGACGTGG
ACGGCCCCGC GAGTGCTGCT GCTCGGCTTC AGCATCTCGG CCGCTGGCCT ACTGATGCTC
GCGGCCATGC TGGGCGTCGA ATCGTTCTGG GTCGGCCTGC TGCCCGGCTT CCTCGTCAGC
GGACTCGGGC ACGGCATGGT CTTCACCTCC GTGTTCGTCC TCGGCAACAC CGGCGTGCCC
GGCGAGCTCA GTGGTGCCGC TGGTGCAGTA CTCACCTCGG CTCAGTACGT GTCCAACGGG
GTCGGGATCG CGATCCTCAC GATCTTCGTC ACCCACATCG CCGGTACCTC CGGGTTCGCA
TGGGCGTTCG GCTTCAATAC CGCCGTCGCC ATCGCCGGCA TCCTCCTCGC CATCTCAACA
CTCCGTAAGG CGCGTCATGA CGCGCAGGTC ACCGACTCAT CTCACCTGAC GCAGTAG
 
Protein sequence
MQRLALATIG LAQFAVAMDF SIVYVAMPTI GADLGMDPAT LQWLITAYSL PFAGFLLFGG 
KVVDRVGALR VFVAGIAVFG AASVLAGVAN ADWLVILGRA LQGLAGAFLS PAILALLSVN
FPTGPVRARA YSIWGAVGAS GLAAGVVFGG LFTEVSWRLI FLVNIPIVLI CIWGTRKMTD
TIKVDAARSR IPTVSTILGT AAILLVVLTL TLFGETGADP LQLGIVGAVA LLTLIVFLTN
EHHSQTPLID RPLRKIKNLR RGALAAALYM SSVGTEFFIV TLFLQDQRGF SPLTAGIAFL
PLAALVTVGN IWAGRLLKTW TAPRVLLLGF SISAAGLLML AAMLGVESFW VGLLPGFLVS
GLGHGMVFTS VFVLGNTGVP GELSGAAGAV LTSAQYVSNG VGIAILTIFV THIAGTSGFA
WAFGFNTAVA IAGILLAIST LRKARHDAQV TDSSHLTQ