| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00860 |
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| Symbol | |
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| ID | 8371599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 91706 |
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| End bp | 93694 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644990400 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003147946 |
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| Protein GI | 256823986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTT CCCGCCCCGA GGACGCCCGC CCGCAGCACC CGCGTCCCCG TGACGCCGTG
GTCGGTGCGC ACCGCGACAG CCTCAGTCAC CGGACGTCCA CGCGACGCTT CCTCGACGAG
GTGAACTACC CCCACAGCAT CCACCCGGCC CTGGTGCCGG GTGTGTCCGT GGAGGACCAG
AAGGTGCGCT TCGGGCTCGA CAAGATCGTC TTCGGCGTGG CCGGCGCCGC CATCGTCGCC
TTCATCGCCT GGGGTCTGGC CGATGCCGCT CAGGTCACCC GGGTGACCAC GGCCATGCTG
ACCTGGGTCA TGACCAACCT GGGCTGGCTG TTCAACGGTC TGGCCATCGT GCTGTTGCTC
TTCCTGCTCG GGATCGCCGT CAGCCCCTAC GGCCGGATCC CGCTCGGCCT GGACGGCGAG
GAGGCCGAGT TCTCCACGGC CAGCTGGACC GCGATGTTGT TCGGCGCCGG CATCGGCATC
GGCATCATCT TCTTCGGCCC CTACGAGCCG ATGAGCTACT TCCTGTCGCC CCGGCCGGGG
TCGGCGGAGG CGGGCAGCGC CGACGCGGTC CCCAAGGCGA TGGCACAGGC CGCCCTCCAC
TGGGGGGTCA ACGCCTGGGC CTTCTACGCG CTGGTGGGCC TGGCGGTCGC CTACGCGTCG
TACCGCCGTG GCCGGGTGCC GCTCATGAGC TCGATCTTCG CGCCCCTGTT CCGCAAGGAC
CCGCACCACA CGGCGGCCGG CCGCACCATC GACATCCTCG CCATCATCGC CACCCTGTTC
GGCACCGCGG CCTCGTTGGG AATCGGTGCC CTGCAGATCG CCAGCGGGGT GGAGATCGTC
ACCGGGTGGG GCACGGGCGG CAACGCGGCG GCGATCACCA TCATCGTGGT CCTCACCGTG
GGCACCATCG CCTCGGCCGT CTCCGGGCTC GCCAAGGGGA TCCGGTGGCT GAGCAACGTG
AACCTGGTGC TCGCGCTGCT GCTGGCCACG TTCTTCTTCG TGGTGGGCCC GACGGTGTTC
CTGCTGAACA TCGTGCCCTC GGTGTTCGTC ACCTACTTCG ACCAGATGCC CTCGATGCTC
TCGGCGAGCA TGGCCGACGG GCCGGAGATG CAGTCCTTCC TGAGCAGCTG GACCACCTTC
TACTGGGCGT GGTGGGTCTC GTGGGCGCCC TTCGTGGGCA TCTTCACGGC GAAGATCTCC
CGCGGCCGCA CGGTGCGCCA GTTCATCCTC GGCGTGCTGT TCATCCCGGG CACGATCATC
ATCCTGGCCT TCACGATGCT GGGCGGCACC GCCATCTGGC ACCAGCGCGA CAGCCAGGCC
ATCGCCCCCG ACGGCACCCT GGAGACGCTG CCGGCCCCGC AGGACATCTT CTTCACCGTG
CTCGACCAGC TGCCCGGCGC GGCGATCGTG GCCCCGGTGG TCATCCTGAT GCTGGCGATC
TTCTTCATCA CCAGCTCGGA CTCGGCGTCG CTGGTGAACT CCCAGCTCTC GCAGGGGGGA
AACCCCGAGC CCAAGCGCCT CGTCACGGTC TTCTGGGCGC TGTGCATGGC CGGCATCGCG
GCGGTGATGC TGCTCATCGG TGGCCAGAGC GCGCTGAACG GCCTGCAGAA CCTCGTCACG
GTGTCGGCCC TCCCCTTCGC GGTGGTCATG ATCGGTATGT GCGTGGCCCT GCTGCGGGAC
TTCTCGACCG ATCCGATGAT GATCCGTCGC GCCTTCCAGC AGCGTGCGGT GGACAACGCG
GTGCGCGAGG GCGTGACCGA GTACGGCGAC GACTTCAAGC TCGCGGTGGA GCCGGCCCAC
GGCGAGGCCG AGCGGTGGTC GGTGGGCAAG GACTTCGAGT CCACCGCCGA GGAGTACACC
GCCTGGTACC AGCGCACCGA CGAGGAGGGT GAGCCGGTGG AGTTCGACTA CGCCACCAAC
GAGTACGTGG AGGAGGAGGT AGACGACACG GACGGCCGGC CGACGGCGGA TGGCCGCCCC
ACCGCCTAG
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| Protein sequence | MPSSRPEDAR PQHPRPRDAV VGAHRDSLSH RTSTRRFLDE VNYPHSIHPA LVPGVSVEDQ
KVRFGLDKIV FGVAGAAIVA FIAWGLADAA QVTRVTTAML TWVMTNLGWL FNGLAIVLLL
FLLGIAVSPY GRIPLGLDGE EAEFSTASWT AMLFGAGIGI GIIFFGPYEP MSYFLSPRPG
SAEAGSADAV PKAMAQAALH WGVNAWAFYA LVGLAVAYAS YRRGRVPLMS SIFAPLFRKD
PHHTAAGRTI DILAIIATLF GTAASLGIGA LQIASGVEIV TGWGTGGNAA AITIIVVLTV
GTIASAVSGL AKGIRWLSNV NLVLALLLAT FFFVVGPTVF LLNIVPSVFV TYFDQMPSML
SASMADGPEM QSFLSSWTTF YWAWWVSWAP FVGIFTAKIS RGRTVRQFIL GVLFIPGTII
ILAFTMLGGT AIWHQRDSQA IAPDGTLETL PAPQDIFFTV LDQLPGAAIV APVVILMLAI
FFITSSDSAS LVNSQLSQGG NPEPKRLVTV FWALCMAGIA AVMLLIGGQS ALNGLQNLVT
VSALPFAVVM IGMCVALLRD FSTDPMMIRR AFQQRAVDNA VREGVTEYGD DFKLAVEPAH
GEAERWSVGK DFESTAEEYT AWYQRTDEEG EPVEFDYATN EYVEEEVDDT DGRPTADGRP
TA
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