| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00460 |
|---|
| Symbol | |
|---|
| ID | 8371559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 49221 |
|---|
| End bp | 50918 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644990362 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_003147908 |
|---|
| Protein GI | 256823948 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.711457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGG AGTCGTTCGG GACGGGGCAG GTGTCCCCGT CGGGTGGCCG GGGCGCCGCG
GGGCGTTCCG CGGACGCGCT GGAGCGGGCG GAGCGGGACC TCGGCCACGC CGTCACGGCG
GTGGAGGCGG TCCGCGCCGC GGAGGTGGCC CTGCTCGATG CGGTGGCCGG GGTCTACGAG
CACACGGCGG CCCACCTGGA GCAGCGTCGC GAGGAGGGCG AGCCGGGTGT GTGGGAGGTG
GCCGATGCCC CGGCGATCGT GGCCGACGAG GTCACGGCCG CCACGGGGGA GCTCCCGACG
CAGGTGCGTT CCGTGGTGGA CCTGGCGGCC AGCGACCCGC AGCGGATGGC CTGCGGCCGC
GCAGCACTGG TCGAGGGGCG CGCGTCCTTG TCGCGGGTGC TGTCCTGGCA CACCGGGACC
CGTCACCTGC AGGTGGCGGA CGCGGTGGCC ATCGGCGAGG TGGTGCTCAC CCGGGCGGCG
GATGGTTCGC CCCGGTCGGC CGCCTCGTTC CGCGAGCTCC TGCGCCGGCG GGTGCGGAAG
GTCGAGGCCG CCGACCGACA GGCCGCTCGG GCGAGGATGG CCGAGGCCCT GGCGGGGCGT
GGTTCGTGGA CCCGGCCCGG TGAGGAAGGG ACCGGGGCGC TGACGGTGGT CGGTGAGGCC
ACCCGGGTGG CAGCCGCCTG GGGCCGGTTG GACGCGGCGG CCCGGCGAGC CAAGGCGGCC
GGCGACCAGC GGACCCTCGC CCAGCTGCGC TCGGACCTGC ACCTGGACCT GTTGCTTGTG
GGCCACCTGC CCGGCACCTG TCCCGGCACT GCGAGCACCT CTGCGAGTGC CGGGTCGGAT
CACGCGACGC CGGGCAGCCG CACCGATGCC GGCCCCGCGG GGAGCGGGTT CTGCACCCAG
CCGATCTTGC CGACGCAGAC CACCCAGAAC CCCACGGGTG CCGAGGCGCC TGCACCTCCG
GTGTGCACGG CCTGCGGGAC GGTCTCGAGC GACTGGTGGC CCCTTCCGCA GATCGGCGAC
CCGGTTCTTC CCCCGGCTCG GTGCACGGTG GTCGTGGGCC TGGACGTCCT GCTCGAGAAC
GCGACCGACG CCGACCGTGA CCCGCCGGAC AGCGGTTCGG GCACGAGCGA TCCCCCGCCG
GATGGCTCAG CGGGTACCGG ACCGCCGGCC CACACACCGA GCGACACACC GAGTGACGCA
CTGGCCGAGC AAGCGCCCGC CCGTGGCGGC GGTGACGACC TGCGTGGCGG TGGCGGCGGC
CTGCGCGGCG CAGCGCTGGG GTGGATGCCC GGGTTCGGGT ACCTCGGCCC CGAGCACGTC
CGTGCCGTAG CGACCCGCGA GGGCTCGGTG TGGCAGCGCC TGGTCGCCGA CCCGGTCACC
GGTCACGCCG TGGCGGTCTC GCCGCACACC TACCGACCGA CGGCGTCGGT GGCCCGGTTC
GTGAGGGCCC GTGACGGCGT CGCCCGTGAC CCCGGCTCAG GCACCCCGGC CGACCAGTGC
GAGCTCGACC ACGTGGTGCC GTTCGAGGCC GGTGGCGCCA CCACCCCGGA CAACCTGCAG
TGCCTCTCGC GCCGGGGTCA CGCGCGCAAG ACCCGCCGTC ACTGGGAGGC GGTCATGGCC
CCCGACGGCT CCGTCGAGTG GACCAGCCTC CTGGGCCAGC GGCAGACCAC CCACCCCCAC
GACTACACCG ACCAGTAG
|
|---|
| Protein sequence | MRRESFGTGQ VSPSGGRGAA GRSADALERA ERDLGHAVTA VEAVRAAEVA LLDAVAGVYE
HTAAHLEQRR EEGEPGVWEV ADAPAIVADE VTAATGELPT QVRSVVDLAA SDPQRMACGR
AALVEGRASL SRVLSWHTGT RHLQVADAVA IGEVVLTRAA DGSPRSAASF RELLRRRVRK
VEAADRQAAR ARMAEALAGR GSWTRPGEEG TGALTVVGEA TRVAAAWGRL DAAARRAKAA
GDQRTLAQLR SDLHLDLLLV GHLPGTCPGT ASTSASAGSD HATPGSRTDA GPAGSGFCTQ
PILPTQTTQN PTGAEAPAPP VCTACGTVSS DWWPLPQIGD PVLPPARCTV VVGLDVLLEN
ATDADRDPPD SGSGTSDPPP DGSAGTGPPA HTPSDTPSDA LAEQAPARGG GDDLRGGGGG
LRGAALGWMP GFGYLGPEHV RAVATREGSV WQRLVADPVT GHAVAVSPHT YRPTASVARF
VRARDGVARD PGSGTPADQC ELDHVVPFEA GGATTPDNLQ CLSRRGHARK TRRHWEAVMA
PDGSVEWTSL LGQRQTTHPH DYTDQ
|
|---|
| |