Gene Ksed_00440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00440 
Symbol 
ID8371557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp46892 
End bp48805 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content71% 
IMG OID644990360 
Productputative hydrolase, CocE/NonD family 
Protein accessionYP_003147906 
Protein GI256823946 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.403131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGG TCCCGACCGC CACCGCCGCG CCTTCCGACG CACCCACCAC CGCGAGCCGC 
GCCGCCACGG CTACCGCCGC CGAGAAGGAG GGCATCACCC ACGAGCAGAA CCCGCAGGTG
CCCGAGGGTG CTGTGTGGAC GCAGGAGTAC TTCCCCTCCT CGCTGCCGTC GAACAACGGT
GACGAGGTGG AGCTGCACGC CGACGTGTTG CGTCCGGCGC ACCTGCCGGC CGACGCGCGG
ACGCCGGTGA TCCTGTCGGT GGGGCCGTAC TTCAGCCACA TCGGGCAGAC GGGGGACGAC
GGGCACCCGG TGGCGGGCCC CTCGCAGCGG TTCACGGACC TCATCGAGGG GGCGGACCTG
ATGGCCCAGG GGTACACCGT GGTGATGGTG GACCTGCGCG GCTTCGGGGG GTCCACCGGC
TGCCTGGACT GGGTGGGTCC CGGTGAGCAG GCCGACGTGG CCTCCGCGGT CGAGTGGGCG
GCGGGCCAGC CGTGGTCCAC CGGGAAGGTG GGGATGTACG GCAAGTCCTA CGACGCCTCC
ACCGGCCTGG TCGGCAACAA CCTGGAGCCC GAGGGCCTGG AGGCCGTGGT GGCCCAGGAG
CCGGTGTGGG ACATGCACAA CTACCTCTAC AGCAACGGGG TGCCGCGGCC GAACAACGTG
TTCACCCCGC GGGCCTACAA CAGCATCGCG ACGCTGCCGG CCCACGCGGG GGACGACGAG
CGCTACCGCG CCAACGCTGA CTACGAGAAG GCGCACCCCG AGTGCACGGC GCAGAACTCG
GCGGACGGGC TGATCGCGGA CCCGGAGTCG GAGTACTGGA AGGCCCGTGA CCTGGCCACG
CAGGCCGAGG GCTCGGACGT GCCGCTGTTC GTGACGCAGG GTTTCATCGA GACGAACACC
AAGCCCGAGG ACATGCGGAA GTACCTGGAC AACCACAGTG GTGAGCAGCG CGGCTGGCTG
GGGCAGTGGA ACCACGTGCG GGGCAACGAC CGCACCGAGG ACGGCCGGTT GGAGATGGGC
CGCGAGGGCT GGTTCACCGA GGTGATCAGC TTCTACGACG AGCACCTCAA GGACACCGAG
CCGGTGCAGG ACTTTCCGGC CTACGTCATC GAGGACAGCA ACGGTGCGTG GCGCGCGCAG
GACGCGTGGC CGCTGGTGAA CAGCACGCGC ACGGTCGACC TGGAGGACGG GTCGTTCGTC
GACGACCGCG CGGGCGAGCC GGGCGCCGCA CGGGGCGCTG TGGCCGACGG CGCCGATGGG
GTGACGCTGG CCGCGGGCGC GGCGCCCCGC ATCGAGGCGG CGGACGGTGC CGCGAAGGGC
CGGGGTCCCG TCGGCGACAT GGAGCGAGGT GCGTCGCTGC AGCCGCAGAA GGGCCCGGTG
GCCCCGGAGG TTCGGCAGCG CAAGGGCAAG GGTGGGCCCG GCACCACCGA GGACGCGTAC
GGGTACGTGA CCTGGTCCAA GCCGGTGAAG CGCGACGTGC GCGTGACCGG CACGCCGCGG
GTGGCCTTCG AGGCCGAGGG CCAGGGCGGT GTGGCGGTGC AGCTGTTCGA CGTGGCGCCC
GACGGTACGG CGGTGCGCTT CGACGAGCAG GTGGTGGCCG TCGACGGCGG GCAGCACGAG
ATCGCGTTGA AGGACACCGA GTGGACGCTC GAGGCCGGTC ACCAGCTGGC GGTGCGGATC
GGCACCATCG GTGCCGACGA GTACTGGTCG CACGAGCCGA GCATGGACAC CGTCGAGGTG
AGCGACGCCG AGCTGACGCT CGAGCTGCAG AACACGCGTT GGGACGAGCC GACCCACGGC
GCGGTCTCGC CCTTCCTGGC GACCTGGGAG CGCGCCTACA CCGAGAAGTG GGACGCCAAG
GCGCCCGGGA CCTTCCAGGT GAAGGCGTCG CAGGGCAAGC CCAAGCACTC CTGA
 
Protein sequence
MLVVPTATAA PSDAPTTASR AATATAAEKE GITHEQNPQV PEGAVWTQEY FPSSLPSNNG 
DEVELHADVL RPAHLPADAR TPVILSVGPY FSHIGQTGDD GHPVAGPSQR FTDLIEGADL
MAQGYTVVMV DLRGFGGSTG CLDWVGPGEQ ADVASAVEWA AGQPWSTGKV GMYGKSYDAS
TGLVGNNLEP EGLEAVVAQE PVWDMHNYLY SNGVPRPNNV FTPRAYNSIA TLPAHAGDDE
RYRANADYEK AHPECTAQNS ADGLIADPES EYWKARDLAT QAEGSDVPLF VTQGFIETNT
KPEDMRKYLD NHSGEQRGWL GQWNHVRGND RTEDGRLEMG REGWFTEVIS FYDEHLKDTE
PVQDFPAYVI EDSNGAWRAQ DAWPLVNSTR TVDLEDGSFV DDRAGEPGAA RGAVADGADG
VTLAAGAAPR IEAADGAAKG RGPVGDMERG ASLQPQKGPV APEVRQRKGK GGPGTTEDAY
GYVTWSKPVK RDVRVTGTPR VAFEAEGQGG VAVQLFDVAP DGTAVRFDEQ VVAVDGGQHE
IALKDTEWTL EAGHQLAVRI GTIGADEYWS HEPSMDTVEV SDAELTLELQ NTRWDEPTHG
AVSPFLATWE RAYTEKWDAK APGTFQVKAS QGKPKHS