Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_00420 |
Symbol | |
ID | 8371555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 44512 |
End bp | 45981 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644990358 |
Product | gamma-aminobutyrate permease-like transporter |
Protein accession | YP_003147904 |
Protein GI | 256823944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.736839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.251816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCACAG CACCATCCAC CCCCGCCGCC GACGCGAGCG CCGCCGAGTC CCCGGACTCC CCGCTGGCCC GCGGGCTGAG CACCCGGCAC ATCCGCTTCA TCGCCCTGGG CACGGCGATC GGCACCGGCC TGTTCCTCGG CTCCGCGAGC GCCATCCAGC TCGCCGGGCC GGCCGTCCTG CTGGCCTACC TGGCCGCGGG GGCCGCCATC TACGTGGTGA TGCGCGCGAT GGCCGAGATG GTGCTGCGCA CCCCGGACGC CTCCTCGTTC GTGGACTTCA CCCAGCGCTA CCTCGGCCGC ACCTGGGGGT TCGTGATCGG CTGGATCTTC ACCGCCGAGA TGCTGCTGGT CGGCATCGCC GACGTCACCG CGCTGCGCAT CTACCTGGGC TCGTGGTGGC CCGCGGTGCC GGGGTGGGCG TGGATGGTGG GCACCATCGC CCTGGTGCTG GGGCTCAACC TCGTGGCCGT CCGGCTGTTC GGGGAGACCG AGTTCTGGCT CACCCTGCTG AAGGTCGGCG CCATCGTCGC GATGGTGGTG CTCGGGGTGG GCCTGCTGGT CACCGGCGCG GGCCTGCCCA CCGGCCAGCC GAGCGTCGCC CACCTGTGGG AGCACGGCGG GTTCGCCCCG CACGGCGCCT GGGGCATCCT GCTGTCGCTG ACGGTCGTGG TCTTCGCCTT CGGCGGCATC GAGACCGTCG GCCTCACGGC GGCCGAGTCG CAGAACCCCC ACCGCAGCAT CCCCGACGCC ATCAACACCG TCCCGTGGCG GATCCTGCTG TTCTACGTGG GCTCGGTGGG CGTCATGCTC ACCCTCGCCC CGTGGACGGG CATCACCGGG GAGCAGTCGC CCTTCGTCCA GATCATCGAT GCGGTGGGCC TCCCCGCCGC CGCCCACGTC CTGAACGCCG TAGTCATCAT CGCGGCCTTC TCGGCGCTGA ACGCCATCAC CTTCGCCATC GGGCGCACGC TGTTCGGCCT GGCCGCGGCC GGGCACGCCC CGGCGGTCTT CGGGCGGGTC TCGGGGCGCG GAATCCCGGG GGCGGCGATC GTCACCGTGG GCGTGGCCCT GGTGATCGGG CTGGTCCTCA ACCTGGTGGT GCCGGACCGG GTGTTCACCT TCGTGGCCTC CCTCGCGAGC TTCGCGACCG TGTTCGTGTG GCTGCTGATC CTCGCAGCCC ACCACGGGCT GCGGCGGCGC ATCGCCCGCG GCGCCCTGCG GCCCGGGGCG TTCGCCACGC CCGGCTGGCC CTGGGTGACC GCGCTCGCGG CCGCCTTCCT GGTGCTCGTG CTGGTGATGA TGGCCTTCCT CCCCGAGGGC CGTGCCGCCC TGGCGGTGGG CGTGGTCACG ACGGCGCTCC TGGCGGGGCT GGGGCACCTC TCGGCACACC GCCCGGACGG CTCGTCGGAG GGCCCGCCGG AGGGCGGCAG GTCAAGAAAG GGTCACGATC ACCCCGAGCC CGTGTCGTGA
|
Protein sequence | MSTAPSTPAA DASAAESPDS PLARGLSTRH IRFIALGTAI GTGLFLGSAS AIQLAGPAVL LAYLAAGAAI YVVMRAMAEM VLRTPDASSF VDFTQRYLGR TWGFVIGWIF TAEMLLVGIA DVTALRIYLG SWWPAVPGWA WMVGTIALVL GLNLVAVRLF GETEFWLTLL KVGAIVAMVV LGVGLLVTGA GLPTGQPSVA HLWEHGGFAP HGAWGILLSL TVVVFAFGGI ETVGLTAAES QNPHRSIPDA INTVPWRILL FYVGSVGVML TLAPWTGITG EQSPFVQIID AVGLPAAAHV LNAVVIIAAF SALNAITFAI GRTLFGLAAA GHAPAVFGRV SGRGIPGAAI VTVGVALVIG LVLNLVVPDR VFTFVASLAS FATVFVWLLI LAAHHGLRRR IARGALRPGA FATPGWPWVT ALAAAFLVLV LVMMAFLPEG RAALAVGVVT TALLAGLGHL SAHRPDGSSE GPPEGGRSRK GHDHPEPVS
|
| |