Gene Ksed_00410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00410 
Symbol 
ID8371554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp43156 
End bp44436 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content72% 
IMG OID644990357 
ProductMn2+/Fe2_ transporter, NRAMP family 
Protein accessionYP_003147903 
Protein GI256823943 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.455948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CCGCCCAGAC CGACGCCCTG CCGCCGGGTG AGCCCGGCCC CCGCGACGGC 
GGCCCCACCG GCACCGGAGC CTCCCCCGGC CACCGCGCCT CCCGCGCCGC GCTGCTGGGC
GCCATGTTCC TCATGGCCAC CTCCTCGATC GGCCCGGGGT TCATCACCCA GACCACCCAG
TTCACGGTGC AGCTCGGCGC GGCCTTCGCG TTCGCCATCC TGGTGTCGAT CGTCCTCGAC
ATCGCCCTGC AGCTGAACGT CTGGCGCGTC ATCGGCGTCA GCGGTCGCCG CGCGCAGGAG
CTCGCCAACG ACGTCGCCCC CGGCCTCGGC TGGGTGCTCG CCGGGCTGCT GCTGGTCGGC
GGCGTGGTCT TCAACATCGG CAACGTGGCC GGCGCCGGCA TCGGCACCGA GGCCCTGGCC
GGCATCGACC CGCGCTGGGG CGCGGCCCTG TCCGCCGTGC TGGCGATCGG CATCTTCCTC
AGCCGCTGGG CCGGGTGGGC CATGGACCGC GTCGTGGTGG TCCTCGGCGC CCTGATGCTG
GCGCTCACCC TGTACGTCGC GATCGTCTCC GACCCGCCGC TGGCCTCCGC TGCGCGCAAC
ACCATCGCCC CGGAGATCAT CGAGCCGCTC GCCATCACCA CCCTGGTCGG CGGCACCATC
GGCGGCTACA TCATCTACGC CGGCGCCCAC CGCCTCATCG ATGCGGGACA CACCGGCCCC
GACCAGGTGG CCGCCATCTC CCGCACCTCG GTGCTGGCCA TCATCGTCAC CGGCGTCATG
CGCACCCTGC TCTTCCTCGC CATCCTCGGC GTGGTCGTCT CCGGGGCGGA CCTAACCGGT
ACCTCGCAGG CGGCCTCCGC CTTCCAGGCC GCGGCCGGCG ACGTGGGCCT GCGGCTCTTC
GGTGCCGTCT TCTGGGCGGC CGCGATCAGC TCGGTGGTGG GTTGCTCGTA CACCACCGTG
TCCTTCCTGA CCTCCTCCAC CCGCACCCCG GCACGCACCC GCAACCTGCT CACCGGCGGG
TTCATCGGCC TGAGCCTCGT GCTCTTCCTG GTGCTCGGCA AGGCCCCCAC CACGCTGCTG
GTCTTCGCCG GCGCGTTCAA CGGCATCCTG CTGCCCGTCG GCATCGGCGT GATGCTGTAC
GTCGGGTGGT TCCGCCGCGA CCTGCTGCAC GGCTACGACT ACCCGAAGTG GCTGCTGGTG
ATCGGCAGCA TCGCCTGGCT GCTGACGCTG TACCTGGCCG TCACCTCGGT GCGGCCGCTG
ATCGACCTGA TGACCAGCTG A
 
Protein sequence
MSTSAQTDAL PPGEPGPRDG GPTGTGASPG HRASRAALLG AMFLMATSSI GPGFITQTTQ 
FTVQLGAAFA FAILVSIVLD IALQLNVWRV IGVSGRRAQE LANDVAPGLG WVLAGLLLVG
GVVFNIGNVA GAGIGTEALA GIDPRWGAAL SAVLAIGIFL SRWAGWAMDR VVVVLGALML
ALTLYVAIVS DPPLASAARN TIAPEIIEPL AITTLVGGTI GGYIIYAGAH RLIDAGHTGP
DQVAAISRTS VLAIIVTGVM RTLLFLAILG VVVSGADLTG TSQAASAFQA AAGDVGLRLF
GAVFWAAAIS SVVGCSYTTV SFLTSSTRTP ARTRNLLTGG FIGLSLVLFL VLGKAPTTLL
VFAGAFNGIL LPVGIGVMLY VGWFRRDLLH GYDYPKWLLV IGSIAWLLTL YLAVTSVRPL
IDLMTS