Gene Ksed_00390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00390 
Symbol 
ID8371552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp41776 
End bp42387 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content76% 
IMG OID644990355 
Productallophanate hydrolase subunit 1 
Protein accessionYP_003147901 
Protein GI256823941 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.543027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TGCCCAGCGG GACCCGCGCG GTGCTCGTGG AGCTCGACGA CCTCACCGAG 
GCCCGGGCCT GGCACGCCGC GCTGGAGGCC GACCCACCGG CCGGCACGCT CGACCTCGTG
CCCGCGGCTC GGACGGTGAT GGTGGTCAGC GAGCCCGGGA CGGACCTCGC CGCGGTGCGC
TCCCACCTCG AGCGCGTGCA GGTCACCGGC GCCCCACCCG CCTCGGACGA GGTGGTCCGC
ATCCCGGTGG TCTACGACGG CGAGGACCTC GCCGACGTGG CCGAGCTGCT GGGGGTGGAC
ACCGAGGAGG TGATGCGCCG CCACGGCGCC GAGGAGTGGG CCGTGGCCTT CGCCGGCTAC
GCCCCGGGGT TCGGGTACTG CGCCGGCACC CGCTTCGACT GGGACGTCCC GCGCCGCAGC
GAGCCGCGCA CGGCCGTCCC GGCGGGCTCG GTGGCACTGG CCGGGGAGTT CACCGGCGTC
TACCCGCGGA AGGGTCCCGG GGGCTGGCAG CTCATCGGGC ACACCGCCGA GCAGATGTTC
GACCCGCACC GTGAGCCGGC GGCGCTGCTG CGCCCCGGGG TCCGCATCGT CTTCGAGGCG
GTGGACGCAT GA
 
Protein sequence
MRLLPSGTRA VLVELDDLTE ARAWHAALEA DPPAGTLDLV PAARTVMVVS EPGTDLAAVR 
SHLERVQVTG APPASDEVVR IPVVYDGEDL ADVAELLGVD TEEVMRRHGA EEWAVAFAGY
APGFGYCAGT RFDWDVPRRS EPRTAVPAGS VALAGEFTGV YPRKGPGGWQ LIGHTAEQMF
DPHREPAALL RPGVRIVFEA VDA