Gene Ksed_00380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00380 
Symbol 
ID8371551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp40922 
End bp41779 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content77% 
IMG OID644990354 
Productbiotin-dependent carboxylase-like protein 
Protein accessionYP_003147900 
Protein GI256823940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.301441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC CCAACCGCCC GGGCCTGCTG GTCCACCGCG CCGGGCCCCT GACGACCGTG 
CAGGACCTGG GACGCCCCGG CATGGGCGGC ACCGGCGTCA GCACCTCCGG CGCGGCCGAC
CGAGCCGCCC ACACGCTGGC CAACCGCCTG GTCGGGAACG GCCCGGGTGC CGCAACGCTC
GAGGTCACCC TCGGCGGCCT GGAGGTCGAG GCCGAGCGCG ACCTCGTCGT GGCGCTGACC
GGCGCGGTCC TGCCGGGCGC CCCCATGCAC GGCACCGTGC GGCTGCGGGC CGGCGAGCGG
ATCGCGTGTG GTTCCCCCGC CACCGGGCTG CGCACCTACC TGGCCGTGCG TGGCGGCATC
GCCACCGAGC CGGTGGTCGG CTCGCGCAGC ACCGACCTGC TGTCGGGGCT GGGACCGCCC
GTGGTGCAGG ACGGCGACCG CCTCCCCATC GGGGACGACC ACGCCCCCCG GGTGGACTAC
GGCGTCGACA CCGCACCCAG CCCGGCACCG CCGTCGGGAC CGGCGCACCT GCCCGTGGTG
CCCGGCCCCC GTGCCGACTG GTTCGCGGCG AACGAGTGGG ACCGCCTGAC CTCCACCGAC
TGGACGGCCT CCAGCCGGTC CAACCGCATC GGGCTGCGCC TGGAGGGCCC GGGCATCGAA
CGCCTCGATG CGGGGGAGCT CGCCAGCGAG GGCATGGTCC GCGGCGCCGT GCAGGTGCCG
CCCAGCGGGG AGCCGATCGT GTTCCTGGCC GACCACCCCG TCACCGGCGG GTACCCCGTC
ATCGCCTACG TCACCGACGA GGCGGTGGAC CTCGCCGCGC AGGTGCAGCC CGGACAGGTG
GTGCGCTTCC GCGGGTGA
 
Protein sequence
MSAPNRPGLL VHRAGPLTTV QDLGRPGMGG TGVSTSGAAD RAAHTLANRL VGNGPGAATL 
EVTLGGLEVE AERDLVVALT GAVLPGAPMH GTVRLRAGER IACGSPATGL RTYLAVRGGI
ATEPVVGSRS TDLLSGLGPP VVQDGDRLPI GDDHAPRVDY GVDTAPSPAP PSGPAHLPVV
PGPRADWFAA NEWDRLTSTD WTASSRSNRI GLRLEGPGIE RLDAGELASE GMVRGAVQVP
PSGEPIVFLA DHPVTGGYPV IAYVTDEAVD LAAQVQPGQV VRFRG