| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00330 |
|---|
| Symbol | |
|---|
| ID | 8371546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 36138 |
|---|
| End bp | 37127 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644990349 |
|---|
| Product | short-chain dehydrogenase of unknown substrate specificity |
|---|
| Protein accession | YP_003147895 |
|---|
| Protein GI | 256823935 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.6279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA CCCCGGCCGC TCCCCCCCGT CAACCGCTCG CCCTGGTCAT GGGCGCCTCC
CGCGGACTCG GCCTGCTCTG CGCCGCCGAG CTGCTGCAAC ACGGCCACCG CGTAGTCCTC
AGCTCCCGCG ACGAGGCCTC CTTGGCTGCC GCGCGCACCC AGTTGCTGGC CGAATACCCG
GGCGCGCGGG TGGACGTCGC CCCCTGTGAC ATCTCCGACC GCCGGGCCGT GCAGGCGCTG
GTGCAGCGCG TGGAGACCGA GCTCGCCCCC ATCGAGGTCC TGCTGACCGT CGCCGGCATC
ATCCAGGTGG GCCCCGTGCA GGCGATGACC CTGGAGCACT TCGACCAGGC CGTCTCCACC
ATGCTGATGG GCCCGGTGAA CCTGACCCTG CAGGTACTGC CCCACATGCG CGAGCGCGGC
CGCGGCCGCA TCGGCACCGT GACCAGCGTC GGCGGCAAGG TGGCCCCGCC GCACCTGCTG
CCCTACTCCA CGGCCAAGTT CGGTGCGGTC GGCTTCAGCG AGGGGCTCAC CGCCGAGCTG
GCCGGCACCG GCATCACGGC CACCACCATC GTCCCGGGCC TGATGCGCAC CGGTTCGCAC
GACGCCGCGC AGTTCACCGG CGACGTGGCC CGCGAGTTCG CGTGGTTCGG CCCCTCGGCC
TCCCTGCCCC TGCTGGCCAT GGATGCCGAG CGTGCCGCCG AGCGGATGGT CCACGGCGTG
CTCGAGGGGC ACACCCACGT GATGCTGTCC CCGGTGACCC AGGTCGGCTC CCGGGTGCAC
GGCCTGGCGC CCTCGTTCAC CACGCGGCTG ATGGGGCTGG CCAACCGGGT GCTCCCAACC
GCCCCGGCCG TGGACCCGCT GGGCCCCGGC ACCACCGTGG AGGGCCGGGT GGCCCGCCAG
GGCCTGACGG GTCGCGCCCG CCGGGTGGTG GACGCGCTCT CCACCCTCGG CGACCGCGCC
GGGGAGCAGA TAAACGAACG CGGCGCCTGA
|
|---|
| Protein sequence | MDITPAAPPR QPLALVMGAS RGLGLLCAAE LLQHGHRVVL SSRDEASLAA ARTQLLAEYP
GARVDVAPCD ISDRRAVQAL VQRVETELAP IEVLLTVAGI IQVGPVQAMT LEHFDQAVST
MLMGPVNLTL QVLPHMRERG RGRIGTVTSV GGKVAPPHLL PYSTAKFGAV GFSEGLTAEL
AGTGITATTI VPGLMRTGSH DAAQFTGDVA REFAWFGPSA SLPLLAMDAE RAAERMVHGV
LEGHTHVMLS PVTQVGSRVH GLAPSFTTRL MGLANRVLPT APAVDPLGPG TTVEGRVARQ
GLTGRARRVV DALSTLGDRA GEQINERGA
|
|---|
| |