Gene Ksed_00070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00070 
Symbol 
ID8371520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp8710 
End bp11337 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content69% 
IMG OID644990323 
ProductDNA gyrase subunit A 
Protein accessionYP_003147872 
Protein GI256823912 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAC AGCCCCCGCA GGACCCGAAC GAGCAGGACC TCCCGCAGGA CGACGTCGTC 
CTGCCCCCGG TGGTGAACAA CGGCCCGGAG ATCCCCCAGC ACGGCCGCAT CGAGCCGGTG
GACCTGTCGT CCGAGATGCA GCGCAGCTAC ATCGAGTACG CCATGAGCGT GATCGTCTCC
CGCGCGCTGC CGGACGTCCG CGACGGCCTC AAGCCGGTGC ACCGCCGCAT CGTCTACGCC
ATGTACGACG GCGGCTACCG CCCCGACCGC TCGTACAACA AGTGCGCCCG CGTGGTCGGC
GACGTGATGG CGAACTACCA CCCGCACGGT GACAGCGCCA TCTACGACGC GATGGTGCGC
CTCTCCCAGC CGTGGTCCAT GCGCTACCCG CTGATCGACG GCCAGGGCAA CTTCGGCTCC
GCCGGCGACG ACGGCCCCGC TGCCCCCCGG TACACAGAGT GCCGCATGCA GCCGCTGGCC
ATGGAGCTGG TGCGCGACAT CACCGAGGAC ACGGTCGACT TCGAGCCCAA CTACGACGGC
CGCACCATGC AGCCGACCGT GCTGCCGGCG CGCTTCCCCA ACCTGCTGGT CAACGGCTCG
GCCGGCATCG CGGTCGGCAT GGCCACGCAG ATCCCGCCGC ACAACCTCCG CGAGGTCGCC
GAGGGGTGCC AGTGGCTGCT GGACAACCCC GAGGCCACCA AGGAGGAGCT GCAGGAGAAG
CTGCTCCAGG TCATCAAGGG TCCGGACTTC CCCACCGGCG CGCTCATCAT GGGCCGCTCC
GGCATCGAGG ACGCCTACCG CACCGGCCGC GGCTCCATCA CCATGCGCGC CGTCGTCGAG
GTGGAGGAGA TCCAGGGCCG CACCTGCCTG GTGGTCACCG AGCTGCCCTA CCAGGTGAAC
CCCGACGCCC TGGCCCGCAA GATCGCCGAG CTGGTCAAGA CCGGCAAGCT GCAGGGCATC
GCCGACCTGC GCGACGAGAC CTCCGGCCGC ACCGGCCAGC GCCTCGTGAT CGTGCTCAAG
CGCGACGCGG TGGCCAAGGT CGTGCTGAAC AACCTTTACA AGCACACCCA GCTGCAGCAG
AACTTCGGCG CGAACATGCT TGCCCTGGTG GACGGGGTGC CGCGCACGCT GCCGATCAAC
GCCTTCGTCC GCCACTGGGT GGACCACCAG GTCGAGGTCA TCGTCCGTCG CACGCGCTAC
CGCCTGAAGC GGGCAGAGGA GCAGATCCAC ATCCTGCGCG GTCTGCTCAA GGCCCTGGAC
GCCCTCGATG AGGTGATCGC CCTCATCCGC CGCTCGCCCA CCGTGGAGCA GGCGCGCGAC
GGCCTGATGG ATCTGCTGGA CATCGACGAG GTGCAGGCAC GCGCCATCCT CGACATGCAG
CTGCGCCGCC TGGCCGCGCT GGAGCGCCAG AAGATCATCG ACGAGCACGA CCGGCTGCAG
GCCCTCATCG AGGACCTCGA GGACATCCTG GCCACCCCGG CCCGCCAGCG CACGATTATC
AGTGAGGAGC TCGCCGCGAT CGTGGAGCAG TACGGCGACG AGCGACGCAC GGAGATCGTG
CCGAGCGACG CCGAGGTCAA CATGGAGGAC CTCATCCCCG ACGAGAACGT GGTGGTCACC
ATCACCCGCG GCGGGTACGC CAAGCGCATC CGCGTGGACG CCTACCGCTC GCAGCGCCGC
GGCGGCAAGG GCGTGCGCGG CACCACGCTG CGCGCCGACG ACGTGGTCGA CCACTTCTTC
ACCACCCAGA CGCACGGCTG GCTGTTGTTC TTCACCGATG CGGGGCGCGT CTACCGGGCG
CGGGCCTGGG AGCTGCCGGA GGGCTCGCGC GACTCCAAGG GCCAGCACGT CGCCAACATC
ATGGCCTTCG GCCCGGACGA GAAGATCGCC CAGGTGCTGA CCATCAAGGA CTACCAGGCG
GCCCCCTACC TGGTGCTCGC CACGAAGAAC GGCCTGGTCA AGAAGACCCG CCTCACCGAG
TACGACTCCC CCCGTTCCGG TGGCCTGATC GCCGTGAACC TGCGGGAGGG TGACGAGCTG
GTGGGTGCAG AACTGGTCTC GGACGCCGAC GACATCCTCA TGGTCAGCCG CAAGGGGCAG
AGCCTGCGCT TCACCGCATC GGACGACCAG ATCCGCCCGA TGGGGCGCGC CACCTCCGGT
GTGACCGGCA TGCGCTTCCG AGGTGACGAC GAGCTGCTCG CGATGCGGGT GGTCCCCTCC
GACGCCGAGG ACGCCGAGGT CTTCGTGGTC TTCCAGTCCG GCATGGCCAA GCGCACGGCG
GTGGACCAGT ACCGCGTCCA GGGCCGTGGT GGACTCGGCG TGAAGGTGGC CAAGGCCTCC
GACAAGGGCG GCGACCTGGT GGGCGCCCTC GTGGTCGGGC AGCAGGACGA GGTCATGGTG
GTCATGAGCT CGGGCAAGGT GGTCCGCAGC CGCGTCGACG AGGTGCGCAT GACCGGGCGC
GACACCTCCG GCGTACGCTT CGCCGACCCG GGCAAGAAGG AGCACATCGT GGCGGTTGCA
CGCACCCACG CCGAGGAGGA GGAGGCCGCC GAGCAGGTGG CTGACGCCGA GGCCGAGCAG
GCTGCCGAGG CGCAGGCCAC GGCGGCCACC GGAGAGGACG AGCAGTGA
 
Protein sequence
MSEQPPQDPN EQDLPQDDVV LPPVVNNGPE IPQHGRIEPV DLSSEMQRSY IEYAMSVIVS 
RALPDVRDGL KPVHRRIVYA MYDGGYRPDR SYNKCARVVG DVMANYHPHG DSAIYDAMVR
LSQPWSMRYP LIDGQGNFGS AGDDGPAAPR YTECRMQPLA MELVRDITED TVDFEPNYDG
RTMQPTVLPA RFPNLLVNGS AGIAVGMATQ IPPHNLREVA EGCQWLLDNP EATKEELQEK
LLQVIKGPDF PTGALIMGRS GIEDAYRTGR GSITMRAVVE VEEIQGRTCL VVTELPYQVN
PDALARKIAE LVKTGKLQGI ADLRDETSGR TGQRLVIVLK RDAVAKVVLN NLYKHTQLQQ
NFGANMLALV DGVPRTLPIN AFVRHWVDHQ VEVIVRRTRY RLKRAEEQIH ILRGLLKALD
ALDEVIALIR RSPTVEQARD GLMDLLDIDE VQARAILDMQ LRRLAALERQ KIIDEHDRLQ
ALIEDLEDIL ATPARQRTII SEELAAIVEQ YGDERRTEIV PSDAEVNMED LIPDENVVVT
ITRGGYAKRI RVDAYRSQRR GGKGVRGTTL RADDVVDHFF TTQTHGWLLF FTDAGRVYRA
RAWELPEGSR DSKGQHVANI MAFGPDEKIA QVLTIKDYQA APYLVLATKN GLVKKTRLTE
YDSPRSGGLI AVNLREGDEL VGAELVSDAD DILMVSRKGQ SLRFTASDDQ IRPMGRATSG
VTGMRFRGDD ELLAMRVVPS DAEDAEVFVV FQSGMAKRTA VDQYRVQGRG GLGVKVAKAS
DKGGDLVGAL VVGQQDEVMV VMSSGKVVRS RVDEVRMTGR DTSGVRFADP GKKEHIVAVA
RTHAEEEEAA EQVADAEAEQ AAEAQATAAT GEDEQ