Gene Ksed_00060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00060 
Symbol 
ID8371519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp6516 
End bp8621 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content68% 
IMG OID644990322 
ProductDNA gyrase subunit B 
Protein accessionYP_003147871 
Protein GI256823911 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACC AGCCGATTCA GACTGACCAG CAGGCACCGT CCTACGATGC GAGCTCCCTC 
CAGGTCCTCG AGGGGCTGGA GGCGGTCCGC AAGCGCCCCG GCATGTACAT CGGCTCCACC
GGTGAGCGGG GCCTGCACCA CCTGGTGTGG GAGATCGTCG ACAACGCGGT GGACGAGCAC
CTCGCGGGGC ACGCCGACCG CATCGAGGTC ACGATCCTGC CGGACAACGC GATCCGCGTG
GTGGACAACG GACGAGGCAT CCCCACCGAC GTCCACGCCA AGGAGGGCAT CTCCGGCGTG
GAGCTCGTGC TCACCCAGCT GCACGCCGGT GGAAAGTTCG GTGGCGACAG CTATGCGGTC
TCCGGTGGTC TGCACGGCGT GGGCTCCTCG GTGGTGAACG CCCTGTCCAG CCGCTTCGAG
GTGGAGGTGC GCCAGAAGGG CCACGTCTTC CGCCAGTCCT TCACCGTCGG CGTCCCGGAC
GCCCCGCTGT CGAAGGACGA GGAGATCGCC GAGGACGTCA CCGGCACCAC GATCACCTAC
TGGCCCAGCG CCGAGATCTT CGACACCACG GTGATCGACT TCGAGACCCT GCGGGCCCGG
TTCCAGCAGA CCTGCTTCCT CAACAAGGGC CTGACCATCC AGCTCACCGA CGAGCGCCCC
CGCGTGACGG ACGCCGACGA CGAGGGCCTG GACGACGTGG ACACCGACAT CGCCGAGGGC
CTCGAGGAGC ACGAGGACGG CACCCCCATC GAGGACGGGC AACCCGATGC GGACCAGCCG
GCCACCGCGG CCGCCACCAA GCCGCGCACG GTCACCTACC GCTACGACGA CGGCCTGTTG
GACTACGTGC GCCACCTCAA CAACTCGAAG AAGACCCAGC CGGTCAACGA CGAGATCATC
GCCTTCGAGA CCGAGGACTC CGAGCGGATG CTCCAGTGCG AGGTCGCGAT GCAGTGGACC
TCGTCCTACT CGGAGTCGGT CCACACCTAC GCGAACTCGG TGAACACCCA CGAGGGCGGC
ACCCACGAGG AGGGCTTCCG CGCGGCCCTC ACACGCCTGG TGAACGAGTT CGCCCGCGCC
AACAAGCTGC TCAAGGAGAA GGACCCGGCC CTCACCGGCG AGGACGTCCG CGAGGGCCTG
ACCGCCGTCA TCTCGGTGAA GCTGGGCGAG CCGCAGTTCG AGGGGCAGAC CAAGACCAAG
CTGGGCAACT CCGAGGTCAA GGGCTTCGTG CAGCGCGCGA TGGCCGACCA GCTCGGCCAC
TGGCTGGAGG CCCACCCGGG CGAGGGCAAG GCCATCGTCG GCAAGGCCGT CCAGGCCGCC
CAGGCGCGCC TGGCGGCCCG CAAGGCCCGT GAGGCCACCC GTCGCAAGGG CCTGCTGGAG
TCCGGCGGCC TGGCCGCCAA GCTGAAGGAC TGCCAGAGCA ACGACCCCAC GGTCTCGGAG
ATCTTCATCG TCGAGGGTGA CTCCGCCGGC GGGTCAGCCA TCGCCGGGCG GAACCCCTTC
AACCAGGCCA TCCTGCCGCT GCGCGGGAAG ATCCTGAACG TCGAGAAGGC GCGGCTCGAC
CGCATCCTGT CGAACACGGA GGTGCAGGCG CTCATCTCCA GCTTCGGCAC CGGCATCGGC
GAGGAGTTCG ACATCACCCG CGCCCGGTAC CACAAGATCG TCCTCATGGC CGACGCCGAC
GTCGACGGCA TGCACATTCG CACGCTGCTG CTGACCTTGC TCTTCCGCTT CATGAAGCCG
CTGATCGAGC ACGGCTACGT GTACCTCGCG CAGCCGCCGC TGTACCGCCT GAAGTGGACG
AACGCCGAGC ACGACTTCGC GTTCACCGAC CGCGAGCGCG ACGCCCTGAC CGAGGCCGGA
GTGGCCAAGG GCCGCCGCCT GCCGAAGGAG AACGGCGTGC AGCGCTACAA GGGTCTGGGC
GAGATGAATT ATCAGGAGCT GTGGGAGACC ACGATGGACC CCGACAACCG GGTGCTGCGC
CAGGTGACCA TGGACGACGC CGCCGCGGCC GACCAGGTCT TCTCGGTGCT GATGGGCGAG
GACGTGGAGT CGCGCCGGTC CTTCATCCAG CGCAACGCCC ACGACGTGCG CTTCCTGGAC
ATCTGA
 
Protein sequence
MADQPIQTDQ QAPSYDASSL QVLEGLEAVR KRPGMYIGST GERGLHHLVW EIVDNAVDEH 
LAGHADRIEV TILPDNAIRV VDNGRGIPTD VHAKEGISGV ELVLTQLHAG GKFGGDSYAV
SGGLHGVGSS VVNALSSRFE VEVRQKGHVF RQSFTVGVPD APLSKDEEIA EDVTGTTITY
WPSAEIFDTT VIDFETLRAR FQQTCFLNKG LTIQLTDERP RVTDADDEGL DDVDTDIAEG
LEEHEDGTPI EDGQPDADQP ATAAATKPRT VTYRYDDGLL DYVRHLNNSK KTQPVNDEII
AFETEDSERM LQCEVAMQWT SSYSESVHTY ANSVNTHEGG THEEGFRAAL TRLVNEFARA
NKLLKEKDPA LTGEDVREGL TAVISVKLGE PQFEGQTKTK LGNSEVKGFV QRAMADQLGH
WLEAHPGEGK AIVGKAVQAA QARLAARKAR EATRRKGLLE SGGLAAKLKD CQSNDPTVSE
IFIVEGDSAG GSAIAGRNPF NQAILPLRGK ILNVEKARLD RILSNTEVQA LISSFGTGIG
EEFDITRARY HKIVLMADAD VDGMHIRTLL LTLLFRFMKP LIEHGYVYLA QPPLYRLKWT
NAEHDFAFTD RERDALTEAG VAKGRRLPKE NGVQRYKGLG EMNYQELWET TMDPDNRVLR
QVTMDDAAAA DQVFSVLMGE DVESRRSFIQ RNAHDVRFLD I