| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00040 |
|---|
| Symbol | |
|---|
| ID | 8371517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 4520 |
|---|
| End bp | 5692 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644990320 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_003147869 |
|---|
| Protein GI | 256823909 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGC GCCACCTGGC GGTCCGTGAC TTCCGCTCCT ACGAGCAGGC GGACCTGGAC
CTGCCTGCCG GGGTGACCGT GTTCGTGGGG CGCAATGGTC AGGGCAAGAC CAACCTGGTG
GAGGCCGCGG GCTATCTCGC GACCCTGGGC TCGCACCGGG TGAGCTCCGA CCAGCCCCTG
GTGCGGGTGG GGGCGGAGCA CGCCATCATC CGCGGCGCGG TGGACCACGA CGGCCGCGAG
ACGGTGCTGG AGCTGCAGAT CAACCCCGGC CGCGCCAACC GGGCGCAGCT GGGGCGCTCC
CCGGTGCCGC GGGCCAGGGA CGTCCTGGGC ACCCTGCGGA CGGTGCTCTT CGCCCCGGAG
GACCTGGCCC TGGTGAAGGG TGATCCTGCG GGGCGCCGGG CCTTCCTGGA CGCCCTGCTG
GTGGCCCGGC AGCCGCGGTG GGCCGGGGTG CAGGCGGACT ATGCCCAGGC GCTCAAGCAG
CGCAATGCCC TGCTGCGGGA CGTCCGGGCG TCGCGCTCGG CGCCGTCCTC CTCCACCGTG
GCGATGCTGG AGGCCTGGGA CGAGCATCTC GCGGTGGGGG GCGCTTCCCT CCTCTACGCA
CGTCTACGAC TTGTTCAAGA CTTACGGAGA TTCGTGGAGA AGGCCTATCG ACAGGTCAGC
GAAGCCGCCT CGGAGGCAGG TCTGACCTAC CGCTGGTCGC TCGTGGGGGA CGAGGCCGAC
GCCGCGCTCT CCGGGTTGAC CGGGGGCGGA CCAGTGCCGG AACGTGACGA CCTCGCGCGC
CTGTTCTCCG CCTCCCTGGG CGCGATGCGG CAGCGCGAGC TCGAGCGCGG AATCACCCTG
GTGGGCCCGC ATCGTGACGA CCTCGACCTC ACTCTCGGAC CGGTGCCGGC GAAGGGGTAT
GCGAGCCACG GGGAGTCGTG GTCGCTGGCG CTCTCCCTGC GTCTGGCCGC CTTCGAGCTG
CTGCGCACGG ACCTGGGGAC CGACCCGGTG CTGGTGCTGG ACGACGTGTT CGCCGAGCTC
GACACGGGGC GCCGCGAGCG CCTCGCCGAG CTGGTGGCCG ATGCGGAGCA GGTGTTGGTG
ACCGCGGCCG TGGAGACCGA CGTGCCGCAG ACCCTGCGGG AGCGGGCCCA CCACGTGGAT
GTCGTGCTCG GGAGTGCGGA GGCCCGATCG TGA
|
|---|
| Protein sequence | MRLRHLAVRD FRSYEQADLD LPAGVTVFVG RNGQGKTNLV EAAGYLATLG SHRVSSDQPL
VRVGAEHAII RGAVDHDGRE TVLELQINPG RANRAQLGRS PVPRARDVLG TLRTVLFAPE
DLALVKGDPA GRRAFLDALL VARQPRWAGV QADYAQALKQ RNALLRDVRA SRSAPSSSTV
AMLEAWDEHL AVGGASLLYA RLRLVQDLRR FVEKAYRQVS EAASEAGLTY RWSLVGDEAD
AALSGLTGGG PVPERDDLAR LFSASLGAMR QRELERGITL VGPHRDDLDL TLGPVPAKGY
ASHGESWSLA LSLRLAAFEL LRTDLGTDPV LVLDDVFAEL DTGRRERLAE LVADAEQVLV
TAAVETDVPQ TLRERAHHVD VVLGSAEARS
|
|---|
| |