Gene Ksed_00030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_00030 
Symbol 
ID8371516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp3514 
End bp4494 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID644990319 
Product6-phosphogluconate dehydrogenase (decarboxylating) 
Protein accessionYP_003147868 
Protein GI256823908 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG GACTCGTCGG CCTCGGCAAG ATGGGCGGCA ACATGAAGAC CCGGCTCGAG 
CGGGCCGGTC ACGAGGTGGT CGGCTTCGAC CTGGACCCGC AGCTGCGGGA CGTCGACAGC
CTGCAGGCCT TGGTGGAGGC CCTGGAGGGC CCGCGCGTGG TCTGGGTGAT GGTGCCGCAC
GGCAAGCCCA CCCGGAACAC CATCGAGGAG CTGGCCAAGC ACCTCCAGCC CGGTGACCTC
GTGATCGAGG GCGGCAACTC GCCCTACCAG GACGACTTTG TCCACGACGA GCTGCTGTCC
GCCAAGGGCA TCGGGTACGT CGACTGCGGT GTCTCCGGTG GCATCTGGGG CCTGGACAAC
GGCTACGGCC TGATGTGCGG TGGGCGTCCG GAGCACGTCG AGAAAGCCAT GCCGATCTTC
GACGCCCTGC GCCCCGAGGG GCCGCGGGAG GAGGGCTTCG TCCACGCCGG TGAGGTGGGT
GCGGGCCACT ACTCGAAGAT GGTGCACAAC GGCATCGAGT ACGGCCTCAT GGCGGCCTAC
GCCGAGGGGT ACGAGCTGCT CATGGCCAAG GAGATCGTCA AGGACGTCCC GGGGGCCTTC
AAGGCCTGGA GCCGCGGCAC GGTCGTGCGC TCCTGGCTGC TGGACCTGCT GGTGGACGCC
CTGGAGCAGA ACCCGGGCCT GAAGGACGTC TCCGGCTACA CCACCGACTC CGGGGAGGGC
CGCTGGACGG TCATCGAGGG GGTCGAGAAC GCGGTGCCGA TGCCGGTGAT CTCTGCAGCG
CTGTTCTCCC GCTTCACCTC GCGCCAGGAG AACTCTCCGG CGATGCAGGC CGTCGCCGCC
CTGCGCGGTG GTTTCGGCGG GCACGAGGTC ATGACCTTCG GCGACGAGCC CTGGGACCGT
CCCAAGCAGG TCCACCAGGC GGCGGAGCCC GCGGACACCC AGGGCGAGGC CACCCCGGGA
GCCGTCGACG ACGAGGCGTG A
 
Protein sequence
MQLGLVGLGK MGGNMKTRLE RAGHEVVGFD LDPQLRDVDS LQALVEALEG PRVVWVMVPH 
GKPTRNTIEE LAKHLQPGDL VIEGGNSPYQ DDFVHDELLS AKGIGYVDCG VSGGIWGLDN
GYGLMCGGRP EHVEKAMPIF DALRPEGPRE EGFVHAGEVG AGHYSKMVHN GIEYGLMAAY
AEGYELLMAK EIVKDVPGAF KAWSRGTVVR SWLLDLLVDA LEQNPGLKDV SGYTTDSGEG
RWTVIEGVEN AVPMPVISAA LFSRFTSRQE NSPAMQAVAA LRGGFGGHEV MTFGDEPWDR
PKQVHQAAEP ADTQGEATPG AVDDEA