Gene Shel_28560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28560 
Symbol 
ID8396744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3164236 
End bp3165003 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID644987594 
Producthistidine kinase 
Protein accessionYP_003145191 
Protein GI257065519 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000031694 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000525882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGAAG AAATGGAACA AATCAGCGAA CAGAGCGTAG CGGACGACTA CTCCCGCGCG 
CTGACGTCTG CACGTATCGC TTGCTACGAC GACTTCAGGA GCGCCCCCCG TATTACGGTG
ATCGAGCCCA CCACTACGGC GGAGTTTATT GAGGCCCTGG CGTCCACCAC CTACACGCAG
GCCCAGATGG CAGGCGGAAC CATTCCCTAC ACTGTCATCA GGGAAGTGAG CGAGAACTTC
ATCCACGCCC AGTTCAAGGA AATCATCGTC TCTATCTTCG ACAAAGGCAA AACCATTCGT
TTTTCAGATC AGGGACCAGG GATTTCCCAA AAAGACAAGG CTGTCATGCC TGGTTTTTCG
TCCGCAACGG CGCCGATGAA ACAATACATC CGCGGCGTCG GATCGGGTCT GCCCATCGTG
CGCGAATACC TGTCGTTCTC CAACGGCCGC ATCACCATAG AAGACAACCT CAAGTCGGGT
GCCGTCATCA CCATCAGCGT TGCCGAGGAG GAAACGCCCA AGCCGGCAGC AGTGCCGAAG
AAGGACGTGC TTATACCTGA GCTCAACGGC AGGGAGAAGG ACATCCTGTT CCTGCTGGCC
CACGACGGAA GCCTTCGCCT AACAGATATA GTCAAGCGTT TGGATCTGAG CAACAGCACG
GTGCATCGCT CGCTGGGCAA ACTTGAGGAA TACGGACTTA TCGAATCCAC CGGCCATATG
AAGAGTTTGA CCGAATTCGG CAAGGACGCT GTGGAAAAAC TCTTTTAA
 
Protein sequence
MPEEMEQISE QSVADDYSRA LTSARIACYD DFRSAPRITV IEPTTTAEFI EALASTTYTQ 
AQMAGGTIPY TVIREVSENF IHAQFKEIIV SIFDKGKTIR FSDQGPGISQ KDKAVMPGFS
SATAPMKQYI RGVGSGLPIV REYLSFSNGR ITIEDNLKSG AVITISVAEE ETPKPAAVPK
KDVLIPELNG REKDILFLLA HDGSLRLTDI VKRLDLSNST VHRSLGKLEE YGLIESTGHM
KSLTEFGKDA VEKLF