Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28510 |
Symbol | |
ID | 8396739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3161357 |
End bp | 3161923 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644987589 |
Product | predicted RNA-binding protein |
Protein accession | YP_003145186 |
Protein GI | 257065514 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00371448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.001116 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGAAG AAGATATCAT CGAAGCGCCT GAAGAGATTG AGGACGACAT GGAGGTCGTC GAAGACGCTA AGCCAAGTTA CGGCAATCAG GTCGAACTGA CCGAGGAAGA ACTCGACCAT GTGGCAGATG TCGCCATCGA TGCCTTGCAG GGCATCTTGA AATACTTCGA TGTGGGCGAA GTTACCATCG ACGAGTACGA AGGCGACGAG CGTGAGCTGA TCCTGGATAT CACCGGAGAC AACTTGGCTA TCCTGATTGG CCGCCATGGC AAGACTCTGG ATGCTCTGCA GTTCATCATT TCCGCCATCA CTACCCGCGA ACTCGGTTTC CGTTATCCCG TGGTGGTAGA CGTCGAAGGC TATAAGAACC GTCAGCGTCA GAAGCTTGAG GGCGTGGCCC GTGCTTCGGC CAACCGTGCA GCTTCCCAAG GCAAGGTTGT GAAGCTGCGT CCTATGACCC CGTATGAGCG CCGCATCGTC CATATTGCGC TCCGCAACGA CAGCCGTGTG GAAACCGCCT CCGAAGGTGA AGGAAGCGCT CGCCACGTTG TGGTCATCCC TCAGTAA
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Protein sequence | MSEEDIIEAP EEIEDDMEVV EDAKPSYGNQ VELTEEELDH VADVAIDALQ GILKYFDVGE VTIDEYEGDE RELILDITGD NLAILIGRHG KTLDALQFII SAITTRELGF RYPVVVDVEG YKNRQRQKLE GVARASANRA ASQGKVVKLR PMTPYERRIV HIALRNDSRV ETASEGEGSA RHVVVIPQ
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