| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28450 |
|---|
| Symbol | |
|---|
| ID | 8396733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 3153578 |
|---|
| End bp | 3154237 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644987583 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003145180 |
|---|
| Protein GI | 257065508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.391718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00254086 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGC TAAACGCCCG TGATGTGTAT TTTGGCACGT ATCTGAAGTT CTTTACAGAT
GGAAAAAAAT ACGGAGCCGC CCTTTCAGGA CCGGACAACG CTATCGGTGA TATAGGAACC
ATCGAATGGG ATCAGGATGC CAACGGCAGG CAGCAGGCCT GGCTAATAAA CCCGTACAGC
ATACGGGTCG GTCACTTCTC CCCCGCCGAC TCTTACAACC TTGCCGTGTA TCAGGCGAAG
GGTTGGACCA TACGGTATGT TCTCAGCTTT GTAGCTTTGA CGGTCGGTAA ATCCAAAAAC
GACTATTGGG GCGAAGTTGC TCTAATCGCA TACAACCCGA GGCACGAAGA TGAAATTGGT
GCGTTCCTCA AAACCTTCTC TAAGCGTATG GGCGAAGGAT TCCGACCTAA CCCCGATCTA
GACTCCGATT CTCTGGAGCG GGCCATCGCT GACCCTACCA GCTGGACTAC AACTCAGAAA
ATCGCACTTC CGAAATTCGG CAGCGATACC ATGATAGTGA AAGACCATCG TACCTTACAT
GACAAGCTCC TCGACAAAGC GAGGAGCCGT AATCTTGGAT GTTATATTAT CAGCTGGGCT
TTTATCGCCC TTCTGGTGCT GGCCGCCATT TACGTCCTGC ATCTTCTGGG GCTCTTTTAG
|
|---|
| Protein sequence | MTSLNARDVY FGTYLKFFTD GKKYGAALSG PDNAIGDIGT IEWDQDANGR QQAWLINPYS
IRVGHFSPAD SYNLAVYQAK GWTIRYVLSF VALTVGKSKN DYWGEVALIA YNPRHEDEIG
AFLKTFSKRM GEGFRPNPDL DSDSLERAIA DPTSWTTTQK IALPKFGSDT MIVKDHRTLH
DKLLDKARSR NLGCYIISWA FIALLVLAAI YVLHLLGLF
|
|---|
| |