| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28390 |
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| Symbol | |
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| ID | 8396727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3144184 |
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| End bp | 3144777 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987577 |
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| Product | protease subunit of ATP-dependent protease |
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| Protein accession | YP_003145175 |
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| Protein GI | 257065503 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.10817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATCT CGTCAGCCGA TACGCCTAAC ATCATCAAGG AGTCCAACCG CGGCTACGAC
ACCTTCCGCA TCGTCGACAA GATGTTGGCC GACCGCGAAA TCGCCTGCAT CGGCCCCATC
GACGCAGCCC AGACTGACTC GCTGTGCCTC CAGCTTCGCT ACCTGCAGAA AGAAGACCCC
GCCGCCGAAA TCACCATCTT CTTCAACAGT CCTGGCGGCG AGGTGCAAAG CGGACTGGCC
ATTTACGACA CGATGCGCGC CGTGAGCTGT CCCGTCCGCA CCGTCTGCTT GGGGATGGCG
GGCAGCATGG CCGCGTTGCT CTTCATCTCC GGCGACCAGC GCGACATGCT GCCGCATTCC
CGCGTGATGA TTCACGATCC GCTCCTACAA GGTGGCGTAA GCGGTAGCGC CCTGGAGGTA
AAAACCATTG CCGACAACCT CATGCGCACC CGCGACATCA CGGCTGAGAT CATAGCCGAG
CACACGGGCA AAACCATCGA CGAGGTGTTG GAAACCACCG CTCACGATGC GTATTTCGAG
GCGGAAGAGG CGGTGGCATA CGGCTTGGCT GACCGCGTCA TCAGGACCTT CTAA
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| Protein sequence | MNISSADTPN IIKESNRGYD TFRIVDKMLA DREIACIGPI DAAQTDSLCL QLRYLQKEDP
AAEITIFFNS PGGEVQSGLA IYDTMRAVSC PVRTVCLGMA GSMAALLFIS GDQRDMLPHS
RVMIHDPLLQ GGVSGSALEV KTIADNLMRT RDITAEIIAE HTGKTIDEVL ETTAHDAYFE
AEEAVAYGLA DRVIRTF
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