| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28170 |
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| Symbol | |
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| ID | 8396705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3121253 |
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| End bp | 3122143 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987556 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003145156 |
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| Protein GI | 257065484 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00641704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AGAACCTGCA AGGCTCCATC GTCGCCCTCG TCACCCCGTT CAACGAGGAC
GGATCCGTCG ACTTCGACGC CCTGGCCGGG CTTATCGACT TCCATCTGGA AAAGGGCACC
GACTCCATCC TGGTGCTGGG CACCACCGGC GAGTCCTCCA CCATGTCCCA TGAGGAAGAC
GACGCGGTGT GCGACTTCAC CGTCAAGCGC GTGGCTGGCC GCGTGCCCGT TATCGCGGGT
TCCGGCTCCA ACGATACCGA GACCATGCGC ATGAAGAGCC TCAGCTACCA GAAGCTAGGC
GCCGACGGTC TGCTGGTCAT CACCCCGTAT TACAACAAGT CCAACGAAGA GGGCATCTAC
CAGCACTTCA AGACCGTTCT TGATGCGGTG GAAATCCCCT GCATCCTGTA CAACGTGCCT
AGCCGCACCG GTTGCAGCAT CTCCGAGAAC AACGTGAAGC GCCTGGCCCA GCACCCCAAC
GCCCTGGGTA TCAAGGAGGC TTCGGGCTCC ATCGCGTATG CCACCAACAT CGCCCGCTAC
CTGAGCGACG ACTTCTTCAT GTTCTCCGGC AACGACGACA TGGTCATTCC GCTGATGTCC
CTGGGCGCCC GCGGCGTCAT CTCTGTGTGG GCGAACGTGG ATCCGGCCGC CGTGCACAAC
ATGACCACTG CGTATCTGGA AGGCCGCCAC GACGAGGCTC TGAAGATTCA GCTGGACAAC
CTGGATCTGA TCCACGCGTT GTTCTGCGAG ACCAATCCGA TTCCGGTTAA GGGCGCCATG
GAGATGATGG GCCTGATCAA GGGTGTGTAC CGCCAGCCGC TGTGGCCGAT GGCCGAAGCC
AGCGCCGTCC GCGTGCAGCA GGCCATGAAG GAGGTCGGTC TTCTTGATTA A
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| Protein sequence | MDIKNLQGSI VALVTPFNED GSVDFDALAG LIDFHLEKGT DSILVLGTTG ESSTMSHEED
DAVCDFTVKR VAGRVPVIAG SGSNDTETMR MKSLSYQKLG ADGLLVITPY YNKSNEEGIY
QHFKTVLDAV EIPCILYNVP SRTGCSISEN NVKRLAQHPN ALGIKEASGS IAYATNIARY
LSDDFFMFSG NDDMVIPLMS LGARGVISVW ANVDPAAVHN MTTAYLEGRH DEALKIQLDN
LDLIHALFCE TNPIPVKGAM EMMGLIKGVY RQPLWPMAEA SAVRVQQAMK EVGLLD
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