| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_28100 |
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| Symbol | |
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| ID | 8396698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 3111386 |
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| End bp | 3115771 |
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| Gene Length | 4386 bp |
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| Protein Length | 1461 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987549 |
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| Product | CoA-substrate-specific enzyme activase, putative |
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| Protein accession | YP_003145149 |
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| Protein GI | 257065477 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
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| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.899466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACCTAG GTATCGACGT CGGCTCAACC ACCACCAAGG CGGTTGTGCT CGATCCCAAA
ACCCATGAGG TGCTGTACCA CAGCTACCGC CGACACCAAG CCCGCCAGGC TCAATCCGTG
GCAAACGCAT TCCGCGACGT AGCCGAGCGC TTTCTCGGCT CCAGGTTCCG AGTTGCCATC
AGCGGGTCTG GTGCCAAGGA CATCGCCACG GCGCTCAATA TCCCCTATGT TCAAGAAGTT
GTTGCGAACT CCATCGCCAT CCAGGAGCTG CATCCGACGG CTCGCTGCGC CATCGAGCTC
GGCGGCCAAG ATGCGAAGAT GATTTTCTTC ACCTACGACT CGAAAACCGA CCGGCTGGCC
GTCTCGGACA TGCGTATGAA CGGCTCTTGT GCGGGCGGTA CGGGCGCGTT TATTGACGAA
ATTGCCTCGC TGCTCAAAAC GCCTGTCGAG AAATTCAACG ACCTGGCTTC GAAGGGTGAA
TCCGTCTTCA ACATTTCCGG ACGCTGCGGC GTCTACGCTA AAACCGACAT CCAACCCCTG
CTCAACCAGG GCGTTCCCAA GGAAGACATC GCGCTTTCCA GTTTTCATGC CATTGCGAAG
CAGACCCTCG GCGGCCTGGC CCAGGGCCTC GAAATCCATC CGCCCGTGGT GTTTGAAGGT
GGTCCGATGA CCTTCAACCC AAGGCTCATC GAAGTGTTCT GCGAGCGTCT GCACCTGAAC
GACGATCAGA TCATCATTCC AGACATGCCG GAAACCATCG TCGCCCGCGG AACAGCGCTT
TCGCTGGAAG GCCTGTTCGC AGACGAGGAC GCCAGCATCA ACCTGCTGTG CTCGGCAGAA
CTGCTCGAGG CAAGCGGCAC CGAGCTGGCC TCCGAGAAAA CCGTCGGCAA GCCCTTCTTC
TCCTCCGACG AGGAGCTTGA TGCGTTCCGC GAACGGCACG CCTTGCCGGA CCATCGTGAT
CCGCTAGAAG GCAAACCCCA GGTCATCAAT GCGTACTTGG GTATCGACTC CGGTTCGACC
ACCACGAAAT TCGCCCTCGT CGATGAGGAC ACGCACCTGA TCGACGAGTT TTACGCCAAT
AACGAGGGCG AGCCGTTGGA CATCGCCAAG GCCGCGCTGA CCGAGCTGCG CGAAAAGTAC
CGCGCCGCGG GCACGAAGCT CAACATTTTG GCCTGCGGCA CCACTGGCTA CGGCGAATTG
CTCTTCCATA GGGCTTTTCA CGCAGACTAC CATGTGGTGG AAACCGTGGC TCATGCCACC
GCCGCCCGCA AATACGTTCC CGACGCCTCG TTCATTTTGG ACATCGGCGG CCAGGATATG
AAGGCCATCT GGATCGACAA CGGCGTCGTC ACGGATATCG TTGTGAATGA GGCCTGCTCA
TCGGGATGCG GATCGTTCTT GGAGAACTTC GGCGCTTCGC TGGGCATCCC CACGAAGGAA
ATCGCCACCG CAGCGTTCCG CTCGCCCTCC CCTGCGGTGC TGGGCAGCCG CTGCACCGTG
TTCATGACCA GCAGCATCGT CACCGAGCAG AAGAACGGCA AGACCTCTGA CGACATCATG
GCAGGCCTGT GCCGTTCCAT CATCGAGAAC GTGTTCACCA AGGTCATTCG CGTGTCGAAC
CTTTCGAGCC TGGGCGACAA GGTGGTCGTG CAAGGCGGCA CGTTCAACAA CGACGCCGTG
CTGCGCGCCT TCGAGCAATA TATAGGTAAG AACGTGGTTC GCGCGCCCTA CCCCGGACTT
ATGGGCGCCA TCGGCGCAGC CATGCTGGCC AAGCAGAACC GCGAAGACAG GATGGCCGAA
GGTCAGACCG GCGAATCCAC CTTCATCGGG CTGGACAACC TGGATGACTT CTCCTACGAA
CGCGTCTCGG GCGTTATCTG CCCCTTCTGC GCGAACCGCT GCAACCGTAC GCTCATGACC
TTCTCCGACG GCGTAACCTG GGTTACCGGC AACCGCTGCA CGAAGGGCGA AATCATCGGC
GACCCTTCGG ACGAAACCAC CCGCGACCTG CTGCGGCACA CCATAGCCTC GCAGAATGCC
GTGCCTGACC TGTTCAAAAC CCGCCAACGG TTGCTGTTCC AGGATTACCC CTGCGAGCCC
CTGTCCGAAG ACCGCGGCAT CACGGTCGGA CTGCCCCGCG TGCTGGCCAT CTGGGATACC
ATGCCGTTCT GGTCCACGTT CTTGCGCGCG CTGGGCTTCA CCGTGAAAAC CTCGCGCCTG
TCCACCCGCG CCATGTACGA AAACGGCCTG TCCGCCGTAG CATCCGACAC GGTCTGCTTC
CCTGCGAAGC TGGTCCATGG GCACCTGCGC GAACTCGTCG GCATGGGCGT CGACCGCATC
TTCATGCCGG TCATCACCGC CGTCGAGCCC GAGAACCAGC ACGACACCAG CGAATCCATG
TGTGCTGTTG TGAAGGGATA TCCCCTGGTC ATCCGTAATT CGGATAATCC TGAGGAGCAG
TTCGGCGTGC CCTTCGACAG TCCGCTGTGG CACTGGCACA CGAACAACGA CCGCGACCGC
CAGCTCAGCC AATACATGCT GGACGCGTTC GGCGTGCCGA AGGAGCTGAC CCTGCAGGCC
ATCGCGCAGG CGGACATCGC CCAGGCCACA TTCCGCAGTC TGATGGACGA GGCGGGGCGC
GAAGCCATCG ATTACGCCCA CAATCACGAT ACCTTCGCCG TGGTGCTGGC GTCACGTCCT
TACCACAACG ATCCTTTGGT CAACCACGAC CTGCCGTCGA TGTTCACCGA GATGGGCCTG
CCCGTGCTCA CACCCGACGC CGTGCCAGGC GTGCGCGAGG TGGATTTGTC CAACAGCCGC
ATCGACGTGG TCAACAACTA CCACGCTCGC ATGTTGGGTT CTGCTGTAAT CGCAGCTCAG
CGGGAAGATT TGGAATACGT GCAGCTGGTC AGCTTCGGCT GCGGCCACGA CGCGTACCTA
TCCGATGAGA TCATCCGCCT GATGAAGGAG GTCTCAGGCA AGACGCCGTT GGTCGTGAAG
GTGGACGAGT CTGACATCCA GGGCCCGCTG CGCATCCGCG CACGGTCGTT CATCGAGACC
ATCAACATGA AACGCCGGCT GATGCGCTCC GGAGGAGTGC GTGCGGACGT GCATGAGCTG
CAGGATTCCT ATCCCGTGAA GTTCACGAAA ACAGACGCGC GCGAACGCGT CATTCTGGTG
CCCAACACCT CGCATGCCTT CTCCCGCCTG ATGGCCGCCG TGTTCAGCAA GCAGGGCGTG
AAGGCGCTGC CGCTGGACAT CGGTCGTGAA CGCGCAATTG AACTGGGTAA ACGATACGTT
CATAACGACA TTTGCTTCCC GGCGCAGATC GTCATCGGCG AGGCGCTGGC TGCTTTGGAA
TCCGGCGAAT ACGACCAATA CGACGTGGCC ATCGGAACCG GCAAGTACAT CGGCGACTGC
CGTCTGACCC ATTACGCGGC GCTGCTGCGC AAGGCTCTCG ACGACGCCGG ATACGAAGAC
ATCCCCATCG TCACCAACGA CGACGTGGAC TTCCACAACA TCCACCCCGG GTTCAAGATG
AGCCTGCCCA GCGCCATCCG CATCGCCATG ACGCTGCCCA TGATCGATAT TCTGGAAGAG
CTTGTGCGCA AGATGCGCCC TTACGAACTG GTTCCCGGTG CGGCAAATGC CGCGTTTGAC
CAGGCCATGG ACGTGTTGAT GGAGGGACTC GAGAAGCATG GCGTGACCGG CGCGACCGCC
GGGTTCAAGC GCGCCATAGC CATCATGAAG GACGTTCCCT ACGACCGCTC CGCCCTGAGG
CCCAGCGTGC TCATCGTGGG CGAGTATCTG CTGAACTTCC ACCCCGGCGC GAACCACGAC
ATCGAGGATT ACCTGGAACG CAACGGCTTG GAAGTTATCG AGGCGCGCAT GACCGACGTC
ATCCGCAAGA CGTATTTCTA TCAGGATGCC CAGGTCAAAG AGTATAAGAT CGAAACCTCC
CTGCAGAACA AGGCGTGGCT GAGCATTGCG AACGGCCTGT TCGAGCGGGC CCACGACAAC
GCCGACCGCA TCGCTAAGGC CCATCCGCTC TACGAGCCGA CCGCTCGCAT GGGCGATTTG
GTGGTGGACA GCGACCCCAT CATCCACCAC ACCTTCGACG CGGGAGAAGG CGTTCTTATC
CCTGGTGAGA TTCTGCATCA CGCCAAGCAC GGCTGCCGGG CGTTCCTCAT CCTGCAGCCC
TTCGGCTGTC TGCCGAACCA CATCGTCGGC CGCGGTATCT CGAAGAAGCT GAAGCAGATG
TACCCCGATG CGCAGATCCT GCCGCTGGAC TACGACCCTG ACGTGAGCTT CGCCAACGTG
GAGAACCGCC TGCAGATGCT CATCATGAAC GCCCGAGAGC ATGACCGCGA GCGCAACCAG
GCATAA
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| Protein sequence | MNLGIDVGST TTKAVVLDPK THEVLYHSYR RHQARQAQSV ANAFRDVAER FLGSRFRVAI
SGSGAKDIAT ALNIPYVQEV VANSIAIQEL HPTARCAIEL GGQDAKMIFF TYDSKTDRLA
VSDMRMNGSC AGGTGAFIDE IASLLKTPVE KFNDLASKGE SVFNISGRCG VYAKTDIQPL
LNQGVPKEDI ALSSFHAIAK QTLGGLAQGL EIHPPVVFEG GPMTFNPRLI EVFCERLHLN
DDQIIIPDMP ETIVARGTAL SLEGLFADED ASINLLCSAE LLEASGTELA SEKTVGKPFF
SSDEELDAFR ERHALPDHRD PLEGKPQVIN AYLGIDSGST TTKFALVDED THLIDEFYAN
NEGEPLDIAK AALTELREKY RAAGTKLNIL ACGTTGYGEL LFHRAFHADY HVVETVAHAT
AARKYVPDAS FILDIGGQDM KAIWIDNGVV TDIVVNEACS SGCGSFLENF GASLGIPTKE
IATAAFRSPS PAVLGSRCTV FMTSSIVTEQ KNGKTSDDIM AGLCRSIIEN VFTKVIRVSN
LSSLGDKVVV QGGTFNNDAV LRAFEQYIGK NVVRAPYPGL MGAIGAAMLA KQNREDRMAE
GQTGESTFIG LDNLDDFSYE RVSGVICPFC ANRCNRTLMT FSDGVTWVTG NRCTKGEIIG
DPSDETTRDL LRHTIASQNA VPDLFKTRQR LLFQDYPCEP LSEDRGITVG LPRVLAIWDT
MPFWSTFLRA LGFTVKTSRL STRAMYENGL SAVASDTVCF PAKLVHGHLR ELVGMGVDRI
FMPVITAVEP ENQHDTSESM CAVVKGYPLV IRNSDNPEEQ FGVPFDSPLW HWHTNNDRDR
QLSQYMLDAF GVPKELTLQA IAQADIAQAT FRSLMDEAGR EAIDYAHNHD TFAVVLASRP
YHNDPLVNHD LPSMFTEMGL PVLTPDAVPG VREVDLSNSR IDVVNNYHAR MLGSAVIAAQ
REDLEYVQLV SFGCGHDAYL SDEIIRLMKE VSGKTPLVVK VDESDIQGPL RIRARSFIET
INMKRRLMRS GGVRADVHEL QDSYPVKFTK TDARERVILV PNTSHAFSRL MAAVFSKQGV
KALPLDIGRE RAIELGKRYV HNDICFPAQI VIGEALAALE SGEYDQYDVA IGTGKYIGDC
RLTHYAALLR KALDDAGYED IPIVTNDDVD FHNIHPGFKM SLPSAIRIAM TLPMIDILEE
LVRKMRPYEL VPGAANAAFD QAMDVLMEGL EKHGVTGATA GFKRAIAIMK DVPYDRSALR
PSVLIVGEYL LNFHPGANHD IEDYLERNGL EVIEARMTDV IRKTYFYQDA QVKEYKIETS
LQNKAWLSIA NGLFERAHDN ADRIAKAHPL YEPTARMGDL VVDSDPIIHH TFDAGEGVLI
PGEILHHAKH GCRAFLILQP FGCLPNHIVG RGISKKLKQM YPDAQILPLD YDPDVSFANV
ENRLQMLIMN AREHDRERNQ A
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