Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28030 |
Symbol | |
ID | 8396691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3103560 |
End bp | 3104294 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644987542 |
Product | hypothetical protein |
Protein accession | YP_003145143 |
Protein GI | 257065471 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCTTG TCGGTGTGGT TGCCTTGGTC GTGGTTGCGG CTATGCTCTT GGTTCCAAGG CTGCTGCCTG GCGAAAAGCT CGAACCGGTT TTCGTGATTG AAGAGCTGAC CGTAGAGACG GGCGACCAGA GCTACCGGAT GGAGCTTGCC ATGGACCGTG CCGAAGATGG AGCGATAGAC AGCTGGCACA GGGAAATGAA ATGGGAGGGC GACGGCAACG AGCGCGATGT CGAGCGCACG TACACCTACG AGAACGGCTG TCCTGTGAGC GTGGAGAGCA CGACAGACGT CCACGACGGC AGCGATCCCA TTAAGGAGAC GCTGGAGGTG GACTGCGAGT TCGACGAGGA CGGCCGCTTG GTCGCCGAGA CCTGGGAGGG TTTCGACTGG AAGGAGACGC AGTCCTACGA ATACGACGAG GACGGCCAGC TCAAACGTTC TGATTTGGAT GACGGAGAAT ACCGGCGGGA GCAGGAGTTC GAAGACGGAC GTGTGGTTTC GTCAGAAGAC TTCAACGTTT TGTTAACGTA CGAGTGGGAT CTCGATGGGG GTGCCGCGCA GCTGATCGAA GCGGGAGAGA CGACGGAGCT GGATATTGAA GTCGACGAGG ACGGCAACAT CGTGTCGATG TACAACCCAA CGAGTGACAC CACGGTCACC GTGAAGTGGG TTGAGATCGA AAAGCCCTGT GCCTACGCCC AGTTCGAGTC CCTGAACAAG ACCCCTTGGG TGTAG
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Protein sequence | MGLVGVVALV VVAAMLLVPR LLPGEKLEPV FVIEELTVET GDQSYRMELA MDRAEDGAID SWHREMKWEG DGNERDVERT YTYENGCPVS VESTTDVHDG SDPIKETLEV DCEFDEDGRL VAETWEGFDW KETQSYEYDE DGQLKRSDLD DGEYRREQEF EDGRVVSSED FNVLLTYEWD LDGGAAQLIE AGETTELDIE VDEDGNIVSM YNPTSDTTVT VKWVEIEKPC AYAQFESLNK TPWV
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