Gene Shel_28020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28020 
Symbol 
ID8396690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3102814 
End bp3103347 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID644987541 
ProductDnaJ-class molecular chaperone with C-terminal Zn finger domain 
Protein accessionYP_003145142 
Protein GI257065470 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA TTGAAGCGTT GAACATCTTG GGTCTGGACT CCGACGCAAC GCAGGAGGAC 
ATCAAAACCG CCTACAAAGA GTGCGTTCAG ATCATGCACC CCGACCGTTT CGCCAACAAC
AAGAAGCTCC AGGACCGTGC CACCGAGCAG TTCAAGCGGC TGCAGGACGC CTACGACTAT
CTGACCAGCG GAAAGGGCAG CAAGAAAGGC TCCTCCGGCT CGTCGGGGCG TCGCGCGTAC
AGTTCCGCCG AGGCTCAGCT TGCCGGTCTT GAGGCTGCGA AAACCCAGCT GGTGGCCCAG
CGCGACACGC TTCTCGACGA GCGTCGCAAC GCCCTCATCA TGTTGGTGGG CGGCGGCATC
ATAGCGCTGT TGCTGCGCCG GTTCGTCGCG GTGGCCGGCC TTGCCGCCAC GGTCATGATC
TGGGGCATCG TCAGTCTGAT TTCCACCCAG CAATCCATCG GAAACATCGA CGACCACATC
AAGGGGATTG ATGCGCAACG TCGCAAGCTC GAGAACGAAA TGGAAGAAGA GTAA
 
Protein sequence
MNRIEALNIL GLDSDATQED IKTAYKECVQ IMHPDRFANN KKLQDRATEQ FKRLQDAYDY 
LTSGKGSKKG SSGSSGRRAY SSAEAQLAGL EAAKTQLVAQ RDTLLDERRN ALIMLVGGGI
IALLLRRFVA VAGLAATVMI WGIVSLISTQ QSIGNIDDHI KGIDAQRRKL ENEMEEE