Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27940 |
Symbol | |
ID | 8396682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3093669 |
End bp | 3094235 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987533 |
Product | hypothetical integral membrane protein (Trep_Strep) |
Protein accession | YP_003145136 |
Protein GI | 257065464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00225976 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGT GGAATTCCAA AAGCGCGTTG CGGGTGCTCC TGTGCGCGGT GCTGTATGCC GCTTTGAGCG CGGTCGTGTG CTTCACGGGC GCCGTCCACC CGATTTTCTT CGTGGGATAC CAGATCACGG CAGGCATCCT GCTTTCGGGT ATTGCGATCT GGGCGTTTCG CAACGTGCAG GCGCCGGGCG TCGCAGCCTG CCTTGCTTTG GCCATGATCC TGCTGCTGGT GGCCATCGGC GATGCCGTCA TGTGGCACGT GGTGCCTCTT GTGGTGATCG GCTTGCTGGC GGAAGCGGTC CGCGCCGTCA GGAAATACGA CTGGCTGGGA GACGTGATCG CCACGGCCGT CATGACGTTC TCGACGTTCG GATACTACGG CCAAATCTGG TTCAACCGGG CATACACCTA CGAATGCGCC ATCGAGGAAA TGCCGGCCGG ATATGCCGAC GGACTTATGG CGGCAAGCCC CGCATGGTCG TTGCCGCTGG TCATCGTGAT CGGCATCGTG GTGTCCGTTG CGGTCGCATA TCTTACGGCG AAGCTGTTCA AGTTGGAGAA GCGCTAG
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Protein sequence | MNTWNSKSAL RVLLCAVLYA ALSAVVCFTG AVHPIFFVGY QITAGILLSG IAIWAFRNVQ APGVAACLAL AMILLLVAIG DAVMWHVVPL VVIGLLAEAV RAVRKYDWLG DVIATAVMTF STFGYYGQIW FNRAYTYECA IEEMPAGYAD GLMAASPAWS LPLVIVIGIV VSVAVAYLTA KLFKLEKR
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