Gene Shel_27760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27760 
Symbol 
ID8396664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3076977 
End bp3078305 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content52% 
IMG OID644987517 
Productpredicted ATPase (AAA+ superfamily) 
Protein accessionYP_003145120 
Protein GI257065448 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGC GAAAAGTATA TGATGAACTG GTCAAATGGA AACGCTCGTC TCAGGGACGC 
ACTGCGTTGT TGATTGAAGG CGCCCGCCGC GTGGGCAAAT CTACCGTCGT CGAAGAATTT
GCCAAAAACG AGTATCGCAG CTACATCCTC ATTGACTTCG CTTTTGCATC GAAACAGGTC
CGCGAGCTGT TTGAAGACGT ATCCGACCTT GATTATCTGT TCCTTCAGTT GCAGCTCCAA
TATGGAGTAC GGCTTTTCAA TCGCGAGTCG CTCATTGTGT TCGACGAGGT GCAGTTATGC
CCGCTCGCCC GTCAAGCTGT AAAGCGCTTG GTGCAAGACG GCCGATACGA CTATGTAGAA
ACCGGCTCGC TCATCAGTAT TAAGCGAAAC ACGACGGGCA TACTCATCCC CAGCGAAGAG
CAAAAGCTGC AGATGCACCC CATGGACTTC GAGGAGTTTC GTTGGGTCTT AGGAGACAAT
GCCACCATTC CCCTTCTCCG TCAGGCATTC GAGGCACACG CGCAGTTGGG CGAGCAAACG
AATCGCAAGC TCATGCGCGA TTTCCGTCTC TATATGCTTG TGGGGGGCAT GCCGCAGGCG
GTCGACGCGT ATCTTTCAAC GAATAACCTC CAGGAGGTCG ACCAGACTAA ACGCACTATT
ATTTCCCTCT ACGAAGATGA CTTCCACAAA ATAGATCCCA GCGGAGCCGT CTCTCGCTTG
TTCGATGCCA TTCCAGCCCA GCTTGCGAAG AAGGCCTCGA GGTATCAGGT GTCCAGCATC
TTGGCCAATC GGCAGGCTTC AGATTTAATT GAAGAACTGT CCGAGCTTCG GGAATCGAAA
ACCGTCCTGT TCGCCCATCA CGTCAGCGAT CCCAATGTCG GGATGTCAGC AACCGTAGAC
CTCGAGAAGT TCAAGTTGTA TCTTGCCGAC ACGGGGCTGT TCGTGACCCT TATGTTTAAG
GACGCAGGTT TTACAGAAAA CATCGTCTAC GACAGGCTGC TTTCCGATAA GCTGCCGGTC
AATTTGGGCG CGGTATATGA AAACGTTGTA GCCCAGGAGC TGGCCGCTCA GGGAAACGGG
CTTTTCTATC ATACGTGGGA AAAGGAAGGC GCCCATCGTA ACTACGAGAT TGACTTCGTC
CTTTCAAGAG GCAAAAAGAT TTGCCCCCTA GAGGTTAAGT CTTCCAGCTA CAAGACGCAC
GCTTCGCTTG ACGCGTTTGC GTTGAAGTAC CCCTCGCGCA TCGGCGACCA GTATCTCGTA
TACACAAAGG ACCAGCATAA AAGCGGCGCC ATCTCCTGCA TACCCACCTA CATGGCACGA
TTCATCTAA
 
Protein sequence
MFRRKVYDEL VKWKRSSQGR TALLIEGARR VGKSTVVEEF AKNEYRSYIL IDFAFASKQV 
RELFEDVSDL DYLFLQLQLQ YGVRLFNRES LIVFDEVQLC PLARQAVKRL VQDGRYDYVE
TGSLISIKRN TTGILIPSEE QKLQMHPMDF EEFRWVLGDN ATIPLLRQAF EAHAQLGEQT
NRKLMRDFRL YMLVGGMPQA VDAYLSTNNL QEVDQTKRTI ISLYEDDFHK IDPSGAVSRL
FDAIPAQLAK KASRYQVSSI LANRQASDLI EELSELRESK TVLFAHHVSD PNVGMSATVD
LEKFKLYLAD TGLFVTLMFK DAGFTENIVY DRLLSDKLPV NLGAVYENVV AQELAAQGNG
LFYHTWEKEG AHRNYEIDFV LSRGKKICPL EVKSSSYKTH ASLDAFALKY PSRIGDQYLV
YTKDQHKSGA ISCIPTYMAR FI