| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27760 |
|---|
| Symbol | |
|---|
| ID | 8396664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 3076977 |
|---|
| End bp | 3078305 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644987517 |
|---|
| Product | predicted ATPase (AAA+ superfamily) |
|---|
| Protein accession | YP_003145120 |
|---|
| Protein GI | 257065448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGGC GAAAAGTATA TGATGAACTG GTCAAATGGA AACGCTCGTC TCAGGGACGC
ACTGCGTTGT TGATTGAAGG CGCCCGCCGC GTGGGCAAAT CTACCGTCGT CGAAGAATTT
GCCAAAAACG AGTATCGCAG CTACATCCTC ATTGACTTCG CTTTTGCATC GAAACAGGTC
CGCGAGCTGT TTGAAGACGT ATCCGACCTT GATTATCTGT TCCTTCAGTT GCAGCTCCAA
TATGGAGTAC GGCTTTTCAA TCGCGAGTCG CTCATTGTGT TCGACGAGGT GCAGTTATGC
CCGCTCGCCC GTCAAGCTGT AAAGCGCTTG GTGCAAGACG GCCGATACGA CTATGTAGAA
ACCGGCTCGC TCATCAGTAT TAAGCGAAAC ACGACGGGCA TACTCATCCC CAGCGAAGAG
CAAAAGCTGC AGATGCACCC CATGGACTTC GAGGAGTTTC GTTGGGTCTT AGGAGACAAT
GCCACCATTC CCCTTCTCCG TCAGGCATTC GAGGCACACG CGCAGTTGGG CGAGCAAACG
AATCGCAAGC TCATGCGCGA TTTCCGTCTC TATATGCTTG TGGGGGGCAT GCCGCAGGCG
GTCGACGCGT ATCTTTCAAC GAATAACCTC CAGGAGGTCG ACCAGACTAA ACGCACTATT
ATTTCCCTCT ACGAAGATGA CTTCCACAAA ATAGATCCCA GCGGAGCCGT CTCTCGCTTG
TTCGATGCCA TTCCAGCCCA GCTTGCGAAG AAGGCCTCGA GGTATCAGGT GTCCAGCATC
TTGGCCAATC GGCAGGCTTC AGATTTAATT GAAGAACTGT CCGAGCTTCG GGAATCGAAA
ACCGTCCTGT TCGCCCATCA CGTCAGCGAT CCCAATGTCG GGATGTCAGC AACCGTAGAC
CTCGAGAAGT TCAAGTTGTA TCTTGCCGAC ACGGGGCTGT TCGTGACCCT TATGTTTAAG
GACGCAGGTT TTACAGAAAA CATCGTCTAC GACAGGCTGC TTTCCGATAA GCTGCCGGTC
AATTTGGGCG CGGTATATGA AAACGTTGTA GCCCAGGAGC TGGCCGCTCA GGGAAACGGG
CTTTTCTATC ATACGTGGGA AAAGGAAGGC GCCCATCGTA ACTACGAGAT TGACTTCGTC
CTTTCAAGAG GCAAAAAGAT TTGCCCCCTA GAGGTTAAGT CTTCCAGCTA CAAGACGCAC
GCTTCGCTTG ACGCGTTTGC GTTGAAGTAC CCCTCGCGCA TCGGCGACCA GTATCTCGTA
TACACAAAGG ACCAGCATAA AAGCGGCGCC ATCTCCTGCA TACCCACCTA CATGGCACGA
TTCATCTAA
|
|---|
| Protein sequence | MFRRKVYDEL VKWKRSSQGR TALLIEGARR VGKSTVVEEF AKNEYRSYIL IDFAFASKQV
RELFEDVSDL DYLFLQLQLQ YGVRLFNRES LIVFDEVQLC PLARQAVKRL VQDGRYDYVE
TGSLISIKRN TTGILIPSEE QKLQMHPMDF EEFRWVLGDN ATIPLLRQAF EAHAQLGEQT
NRKLMRDFRL YMLVGGMPQA VDAYLSTNNL QEVDQTKRTI ISLYEDDFHK IDPSGAVSRL
FDAIPAQLAK KASRYQVSSI LANRQASDLI EELSELRESK TVLFAHHVSD PNVGMSATVD
LEKFKLYLAD TGLFVTLMFK DAGFTENIVY DRLLSDKLPV NLGAVYENVV AQELAAQGNG
LFYHTWEKEG AHRNYEIDFV LSRGKKICPL EVKSSSYKTH ASLDAFALKY PSRIGDQYLV
YTKDQHKSGA ISCIPTYMAR FI
|
|---|
| |