Gene Shel_27720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27720 
Symbol 
ID8396660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3071764 
End bp3072336 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content58% 
IMG OID644987513 
Producttranscriptional regulator 
Protein accessionYP_003145116 
Protein GI257065444 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.754006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAG AAAAGACCGA CTTGCGCGTG TTGCGTACGA GGGCCGCCAT CAAGCAGGCA 
TTCATCGAGT TGGTGGTCGA GGTGGGGCTG GACAGGATGT CGGTTAAAAG CCTGACCGAG
CGTGCGGGCA TCAACCGCAA GACGTTCTAT CTGCATTACG AGACCATCGA GGCGCTGTTC
GAAGACGTGT TGACCGAGGT TATGGACGAC TATTTCGCGA ATTATGAGAC CACGCCCGAC
GTGCCCGAGG ACATCGACGG CCATGCTCAG CGGTTCTTTC TGTTCCTGGC GGGGCAGCCG
GAGTATGTGG AGAAGCTGGT GTGTACGCCC AGCTATTACC GATTCGGCGA AAAGGTGTAT
TACGAGCAGA TGGATCGCTA TAGGGAAGCA GGCAATCCGT TCGTGCCGAT GTCGGAGGGC
GCGCAAACCT TGCTGTATCG GTTCATCCGT GCGACGGCGC TCGATTTCTA TCGGGTGTGG
GTGGCCGAGG GCAAGAAGGT GGATCCTGAA GAAGCTGCTC AGCTGTTGAG CGATTTGACC
TGCCGCGGTG TGGAGCCGCT GTTGCGCAGC TAG
 
Protein sequence
MDQEKTDLRV LRTRAAIKQA FIELVVEVGL DRMSVKSLTE RAGINRKTFY LHYETIEALF 
EDVLTEVMDD YFANYETTPD VPEDIDGHAQ RFFLFLAGQP EYVEKLVCTP SYYRFGEKVY
YEQMDRYREA GNPFVPMSEG AQTLLYRFIR ATALDFYRVW VAEGKKVDPE EAAQLLSDLT
CRGVEPLLRS