Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27720 |
Symbol | |
ID | 8396660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3071764 |
End bp | 3072336 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644987513 |
Product | transcriptional regulator |
Protein accession | YP_003145116 |
Protein GI | 257065444 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.754006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAG AAAAGACCGA CTTGCGCGTG TTGCGTACGA GGGCCGCCAT CAAGCAGGCA TTCATCGAGT TGGTGGTCGA GGTGGGGCTG GACAGGATGT CGGTTAAAAG CCTGACCGAG CGTGCGGGCA TCAACCGCAA GACGTTCTAT CTGCATTACG AGACCATCGA GGCGCTGTTC GAAGACGTGT TGACCGAGGT TATGGACGAC TATTTCGCGA ATTATGAGAC CACGCCCGAC GTGCCCGAGG ACATCGACGG CCATGCTCAG CGGTTCTTTC TGTTCCTGGC GGGGCAGCCG GAGTATGTGG AGAAGCTGGT GTGTACGCCC AGCTATTACC GATTCGGCGA AAAGGTGTAT TACGAGCAGA TGGATCGCTA TAGGGAAGCA GGCAATCCGT TCGTGCCGAT GTCGGAGGGC GCGCAAACCT TGCTGTATCG GTTCATCCGT GCGACGGCGC TCGATTTCTA TCGGGTGTGG GTGGCCGAGG GCAAGAAGGT GGATCCTGAA GAAGCTGCTC AGCTGTTGAG CGATTTGACC TGCCGCGGTG TGGAGCCGCT GTTGCGCAGC TAG
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Protein sequence | MDQEKTDLRV LRTRAAIKQA FIELVVEVGL DRMSVKSLTE RAGINRKTFY LHYETIEALF EDVLTEVMDD YFANYETTPD VPEDIDGHAQ RFFLFLAGQP EYVEKLVCTP SYYRFGEKVY YEQMDRYREA GNPFVPMSEG AQTLLYRFIR ATALDFYRVW VAEGKKVDPE EAAQLLSDLT CRGVEPLLRS
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