Gene Shel_27590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27590 
Symbol 
ID8396647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3057935 
End bp3058747 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content61% 
IMG OID644987501 
Producthypothetical protein 
Protein accessionYP_003145105 
Protein GI257065433 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.945374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAG AAATCCGCTC CATCGGCAGC CTCATCGTTT CCCGCGCCTG GCTGTATGAA 
CTGTTCCGCA AAGCCATAGG CGGCCAGCCC ACCGAGGATA TCGTTTCCTT CCTCACGTGC
GCCACCACCG CCGACGTCTT AAGCGAGTAC GCTGCGGACG ACACCGAGGA CTGTGCTGTT
GTGCGGAATT TAGCTGAGAT GTGCAGCAGG CAGGATGCGG TTACCCTTGA AGTCTGCGCC
AGCGACTACA ATTCCGTGGT CAATGCGCTT GGCAGCCGCA GCGTGCCTCT GTGGGAATCC
TCCTGGATTG CACCGGACGG AGCCCTGTTC AGCGCGCGGA CGCTCGCCGT TCGTCAGGCG
TTTCGCAGCA AGGACCTGCA GGCGAAACGC TTCAACCGCG TTCCCGAAGA CAGCCTGGCC
ATGATGCTCG AATTCGGAGC GAAGCTCGCA AAAGACGACT ACCGCTCCTT CGTCAACGGC
GACGCCGCAA AGCTTGCGTC GTGCCTGTCC GACGAGGCCG CGTTCATCAA CGAGCACCTG
CTGAACTGGC TGCCTCAAGC CGTAGCGAAG GCCCAGGAGA AGAACGGCGC CGAAAACCTG
TACGTTGTCA TGCTCAAGAC CATCGAGGCG TTCCTCCGTC TGGATGCGGC ATTCGCAGCC
AACGCCGTCG CATGGCTGCA AGGCCAGCCG AGCTATGGCG CGGTGGAGGA CGGTCCGGAA
CTCAGGGCGT TCGACGCCAT CATGGTCGAG CTGAAGGAGC TCGAAACCAT ACAGCCACCG
TTCATCGTCG ATTCGGAGAT CGTCTCGATC TAA
 
Protein sequence
MQEEIRSIGS LIVSRAWLYE LFRKAIGGQP TEDIVSFLTC ATTADVLSEY AADDTEDCAV 
VRNLAEMCSR QDAVTLEVCA SDYNSVVNAL GSRSVPLWES SWIAPDGALF SARTLAVRQA
FRSKDLQAKR FNRVPEDSLA MMLEFGAKLA KDDYRSFVNG DAAKLASCLS DEAAFINEHL
LNWLPQAVAK AQEKNGAENL YVVMLKTIEA FLRLDAAFAA NAVAWLQGQP SYGAVEDGPE
LRAFDAIMVE LKELETIQPP FIVDSEIVSI