| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27570 |
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| Symbol | |
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| ID | 8396645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 3054410 |
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| End bp | 3057199 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987499 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003145103 |
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| Protein GI | 257065431 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.805865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATTA TCGACCATCC TATGGATCGT AGGAAGTTCT TGCGCGCTGG CGCCATCGCA
GGCGTTGCGG CAGCCGGACT GGCCGGCTGC ACGCCCGAAG CAGGAACGCC CGACGGCGGA
TCGACCGACT CAAAATCAAG CGCAAACGGC GACGTCCAAG CGACCGTCTG CGAAAACGAC
CAGGCCATCA TCGACGGCCT CGGCGAATGG AAGTGCGGCC TGTGCTGGGC CAACTCCAGC
TGCGGCGGCT ACTGCGTCAA CTACCGCTAC GTCGTCGACG GCGTCGTTGT CCGCAGCGGC
ACCGACAACG GCCATGAGGA CACCGAGGAA ACGCCCCAGT GGCGCGCATG CCCCCGCGGA
CGCTCCAAGA GCCAGAACGT ATACGGCGCA GAGCGCCTTC GTTATCCCCT GAAGCGCAAG
AACTGGCAGC CCGGCGGCGT GGATTACCAC CCCGAACTGC GCGGTAAGGA CGAATGGGAG
CGCATCACCT GGGAAGAGGC CATCGAACTG GCCGGCGGCG AAATCAAGCG CATCTACGAC
AACTTCGGCC CCGAATCCGT CCTTCTGACC AGCTACTACG TCGTGCCCAG TCTGTTCGGC
AAACTGGGCG GCTACTGGAG CTGGGAAGAC ACCGTTTCCT ACGGCTCCTA CACCGCAACC
TGCGAGACGC TGGGACTCGG CTACTACGGC GAACCCGGTC TGCCCGCCAT GAACGACCGC
CTCGACCTCA AGAACGCCGA GTACATCGTC ATGGCCAGCG GCAACCCCGC CTGGGCAGCC
ACCGGCAATC CTCTGTACTA CCTGCAGCTG GCCCGCGACA ACGGCACCCA GTTCGCCTAC
ATCGGCCCCT CCTACAACGT AAGCGCTTCC GCCCTGGACG CCAAGTGGAT TCCCGTGCGC
AACGGCACCG ACACGGCGTT GTGGCTGGCC GTCGCCTACG AAATGATCCG CATGGACGAA
GAGACCGGCG ACATCATCGA CTGGGACTTC CTGAATACAT ACACCCTGGG CTTCGACATG
AACCACATGC CCGAAGACGC CAAGCTCGAG GAATGCTTCA AGGACTACAT CCTGGGCGAA
TACGACGACC TGCCGAAGAC CCCCGAATGG GCCACCGAGA TCTGCGGCAC GCCCGTCGAG
GACATCACCT GGCTCGCCGA CGTCATGAGC AAGAAGTACA AGACCATGCT GCTGCACTCC
TTCGCCGCAT TCCGCACCAC CGGTTCTGAG AACCTTTCCC AGGCCATGAT GACCGTCGCC
CTGATGGGCG GCCATGCGGG CAAGTCCGGC CACTGCTTCG GCCCCGGCCT GTACGCCCAG
TTCGCAGCCA ACGGCGGCGA GCACCTGGTT CGCTTCGGCA AGTACGACTA CATCTGGAGC
GACGACCCCT TCTCCGCTTC CGCCCTCATC CCCGGCATCA AGGGCTGGAC TGCTGTCGCC
GACGGCCACT TCACGTCGTA CAGCAACTCC AACCTTGCAG GCACCACCAG CGATTTCCAT
GCGGCCGAAG AGCACGACCT TGACATCCGC CTGTGGTATA GCTGCGCCAA CAACTCGCTG
CACACCAAGG GCAACGGACA GCTCGAGGGC GTCCGTGCGG TCCGCGAAGG CAACATTGAA
TGCATCATCG CCCAGGATCT TCTGGTCACC GACACCGTGA TGTTCTCCGA CATCATCCTG
CCGGCAACCA CGCCCTGGGA AGGCAACCTG GATCCGGCGG AAGGCGACGT CATGTGGGTG
GGCAACACCA CCGCCATCGA CGGCGACCTC AACGGCGACC ACAACAAGGA GATCTTCCCC
GCCATCCATC CCATCATCAA GCCCCTCTTC GACACCAAGA GCGACGGCTG GATCTGGCGC
AAGCTGACCG AGGCCGTGGG CGTTGCCGTC GAGGACATCT TCCCCGTCAG CGAGGTCCAG
TTCTGGTTCG ACCTGACCGC CGACGCCACC TTCTGCAACG AGAACGGCGA ATGGCAGCAC
ATCTTCAACG TGACCCAGGA GACCATCGAC AAATACGGCG TCGATTACCA GGTCCAGACC
GACGGCGTCA TGGATCTGGA AGAGTTCTTC AAGCAGGGCT ATTTCAGCGT CGACCGCAAG
CTTGAAAACG ACCCGCACCT GTTCATCAAG TTCAAGGACT TCATCGACGA CCCCGAGGCC
AACCCCCTGA CCACCGCCAC CGGCAAGTTC GAGATCTATT CCCAGTCCAA GGCGGACGGC
TACAACACCA CCGGCCTTTC GGAAGAGCCC ATCAAGCCCT ATGCGAACTA CTTCACCCCC
AACAACGGCT ACGTCGCCTC CTTCAAGAAT TGGGAGACCA AGGAGCCGGG CGACTATCCC
TTCGTGCTGA GCCAGCCCCA CTACCTGCGT CGCGCCCACA CCCAGAACGA CGGTTCCACC
TGGCTGCGCG AGGCCCTGCA GAACCCCTTC TTCGTCAGCC GCCCCGACGC GGACGCCAAG
GGCATCAAGA CCGGCGACAC CGTCCGTGTG TGGAACGAAT ACGGCCAGAT CCTGCGTCAG
GCATCCGTCT TGAGCTCGCT GGTCCCCGGA TGCGTGGCAC TGCCCCATGG CGCCCACTTC
GACCTGGACG AGAGCGACCC CGACAACCCC ATCGACCTCG GCGGATCCGA GGCCATGCTG
CTCGGCCCGA AGGTGAGCAA CTACCACTAC GCCCTGTCCG GCTACAACAG CACGCTGGTG
AACTTCGAGA AGTACGATGG CGATCCCATC CCCCACGATG GCGAGCGCAT GGTTGCCCAC
ATCGATTTCG ATCAGTTCGA CGCCGAGTAA
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| Protein sequence | MGIIDHPMDR RKFLRAGAIA GVAAAGLAGC TPEAGTPDGG STDSKSSANG DVQATVCEND
QAIIDGLGEW KCGLCWANSS CGGYCVNYRY VVDGVVVRSG TDNGHEDTEE TPQWRACPRG
RSKSQNVYGA ERLRYPLKRK NWQPGGVDYH PELRGKDEWE RITWEEAIEL AGGEIKRIYD
NFGPESVLLT SYYVVPSLFG KLGGYWSWED TVSYGSYTAT CETLGLGYYG EPGLPAMNDR
LDLKNAEYIV MASGNPAWAA TGNPLYYLQL ARDNGTQFAY IGPSYNVSAS ALDAKWIPVR
NGTDTALWLA VAYEMIRMDE ETGDIIDWDF LNTYTLGFDM NHMPEDAKLE ECFKDYILGE
YDDLPKTPEW ATEICGTPVE DITWLADVMS KKYKTMLLHS FAAFRTTGSE NLSQAMMTVA
LMGGHAGKSG HCFGPGLYAQ FAANGGEHLV RFGKYDYIWS DDPFSASALI PGIKGWTAVA
DGHFTSYSNS NLAGTTSDFH AAEEHDLDIR LWYSCANNSL HTKGNGQLEG VRAVREGNIE
CIIAQDLLVT DTVMFSDIIL PATTPWEGNL DPAEGDVMWV GNTTAIDGDL NGDHNKEIFP
AIHPIIKPLF DTKSDGWIWR KLTEAVGVAV EDIFPVSEVQ FWFDLTADAT FCNENGEWQH
IFNVTQETID KYGVDYQVQT DGVMDLEEFF KQGYFSVDRK LENDPHLFIK FKDFIDDPEA
NPLTTATGKF EIYSQSKADG YNTTGLSEEP IKPYANYFTP NNGYVASFKN WETKEPGDYP
FVLSQPHYLR RAHTQNDGST WLREALQNPF FVSRPDADAK GIKTGDTVRV WNEYGQILRQ
ASVLSSLVPG CVALPHGAHF DLDESDPDNP IDLGGSEAML LGPKVSNYHY ALSGYNSTLV
NFEKYDGDPI PHDGERMVAH IDFDQFDAE
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