| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27560 |
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| Symbol | |
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| ID | 8396644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3052802 |
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| End bp | 3054043 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644987498 |
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| Product | regulatory helix-turn-helix protein, lysR family |
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| Protein accession | YP_003145102 |
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| Protein GI | 257065430 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.144166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCGA ATGCGGCGCA GCTGGTCAAC GCCCTATCAA AATACACAAA CGAATTTCAA
TCATGCTGCG ACGCCATGAG AGAAGCGTAT TACCGCAATA AAGACCTGCA GGGCTTCTGC
CAGGCCCTGT CGGAATTCGT CGGCAATCCC GTGGTGGCCT ACGATGCGTC GTTGCTGCCT
GTGGCGCAAT CGATCATTCC CAAAGACATC GCGCTGCAGA TGTTCGGGGC CGAAAAGGCG
AACAAGGAGT TTGTACTCCA TACCGTTCCC GACTGGAAAC GCGAGAACAA CGAGGACGTG
TTCACCCGCG TGGGCGCGAA GAGGATCTCC GACAGCTCGG GAGATCAGCC TACAGCGGCG
GTCAATGTGC TGTTCAAAGG CGAGTTCATG GGCTATATCG AGATTTTCGA GGTCTATAAG
CCCATTACCG ACGGGGAAAT GGTTGCGCTG GAGGCGGCTG CAGACATAGC TTCGGCATCG
CCCTATTCCT TCGAGGAGAG CGGATTCCTC ATCAGTCGTC TGGAGGGGCG CGGCGTCAAG
GGAGACCTTA CGTCAAGTTG GTTTTCGGCA TTGCATTGGG CCAAAGACGA CGGCACCTAC
GTTATTGCGG TGTGCCTGCC TGAAGAGAAA ACCGGCGACA AGCTTTCCGT GGATCATGTC
GTTCGCATGC TGAGGCTTCT GCTGCCGTAT TCCGTCAGCC AGCAGATGGG CGAAATGGTG
GTCGCCGTGG TCAATGGGCG TTTCATCGGC CGGGAGAAGG CTCTTGATTC GGTTGCCGAT
TTCCTTACGC AGCTCAAAAT GCCTATCTAT ATTGGTGCCA GTGAGATCAT GCAGGGCGTC
GGCCTGTTGC ATGAAGGGTA TGAACACGCG GAATTCGCGG CCCGCATCTC GAAAAGCAAG
AAAGGCGGGG CGGTGTGCTT TGAGGAATGC CGATTCGCCT ATCTGAACGA GCTGTGCGAC
CTTGACGAGA ACAAATCGCT GATCGTGGAT GGGCGGATTG CCCGCATGCG GGCGGATGAC
GAAGCCGCGG GGACCGATAA CGTCGAAACG CTGTGCGCCT ACATCGAGAC CGGATTCAGT
TTGGGCGCTA CGGCGGAGGC CCTGCATGTG CATCGCAACA CCATTTCGTA TCGCTTGAAG
CGCTTCCGCG ATGAGTATGG AATCGACCTT TCCGTCCCTG TTCAGGGGAA GGATGTCGTT
TTGCTGCTCC TGCTGTCGTG TCGGCTGGCG ATGGGCGAGT AG
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| Protein sequence | MGANAAQLVN ALSKYTNEFQ SCCDAMREAY YRNKDLQGFC QALSEFVGNP VVAYDASLLP
VAQSIIPKDI ALQMFGAEKA NKEFVLHTVP DWKRENNEDV FTRVGAKRIS DSSGDQPTAA
VNVLFKGEFM GYIEIFEVYK PITDGEMVAL EAAADIASAS PYSFEESGFL ISRLEGRGVK
GDLTSSWFSA LHWAKDDGTY VIAVCLPEEK TGDKLSVDHV VRMLRLLLPY SVSQQMGEMV
VAVVNGRFIG REKALDSVAD FLTQLKMPIY IGASEIMQGV GLLHEGYEHA EFAARISKSK
KGGAVCFEEC RFAYLNELCD LDENKSLIVD GRIARMRADD EAAGTDNVET LCAYIETGFS
LGATAEALHV HRNTISYRLK RFRDEYGIDL SVPVQGKDVV LLLLLSCRLA MGE
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