| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27530 |
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| Symbol | |
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| ID | 8396641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3049009 |
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| End bp | 3051018 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987495 |
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| Product | predicted membrane protein |
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| Protein accession | YP_003145100 |
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| Protein GI | 257065428 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4907] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00352231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGAA ACACCTCATA CACACACCTT CCAAAGGGCA GGAGCCTGGG CAGGCTGCAG
GTCTTCTCGA AATCCCTCTT GGTGCTTGCC GTCGTCATGG CGGCGGTGCT TGCTCTGTTC
ATGTTCATGC GCCCGGCCGA AGCGTACGCC AAGGAATACA CCTGCCCGCA AACCGTCATG
AACGCCGACG TGTCCGACGA CGGTACCTTG ACCGTCCAGG AGAACCGCAC CTTCGATTTC
GACGGAAGCT TCACGGCGAT CTGGTGGGTG TTCGAGCAGC TCGGCTACGA CGCGCAGATT
GTGATCGACA ACGCCGTGGT CACCAACGAT GCTACGGGGG AGTCCCTGGA CCTGGACGAA
GTGCCCTTCC AGGAGTATTG GCGCGAGTAC GGCGCCTCCG ACGAACCCGC CTGGACCTGG
GACGCCGAGC AGAACACCGT GTACGTGTTC TGCCCCATGG CGGATGGCAC CTACACCATT
ACGCTGGAAT GGCACGCCGA GAACATGGCC ACGCTGTATG CCGACACGGG TGAGGTGTAC
TGGCAGTTCG TCGGCGGCGA CTGGGCCATA GACTCCTACG ACGTCACGCT GAACCTGCAG
CTGCCGGTGC CCGACGGCGA AACCGTCACG GCCGGCGAGA ACGTGCGTGT CTGGGGCCAC
GGGCCTTTGG ATGCGACGGT CCATGTGGAC CAGACGGGCC TGGTCACGGC CGATGTCCCC
GTTGTTCCGT CGGGCGAGTT CGCCGAGGTG CGCGCGACCA TTCCCACCGA GTGGCTGTCG
GGCGTCGCGC CGGGCGCCTA CAACGACCAG AGCGGCACCG AGAAGATGGA CGAGATCCTG
GCCGAAGAGC AGGAGTGGGC CGACAAGGCC AACACGCAGC GCATCATGGC CGTGTCGCAC
ATGGCCATGG GCATACTCGC TTCCATCGGC TTGATCATCT GGTCGATCGT CATGTTCTTC
CGGCATGGGC GGGAATACAG GCTGCCCAAG GACAAATACT GGCGCGACCT GCCGGCCCCC
GGCGTGCACC CTGCGGTCAT CAGCCGCCTG TGGTCGTGGA ACCGAGAGGA CAACAACGAC
TTCGTGGCCA CGCTCATGCA CCTGTGCAAC ATCGGCGCCA TCCGCATCGA CCCCGGCACC
TACCAGCGCA AACGTAAGAC CGTCAGCGAT TACTACATCA CGCGGCTCGA CGGGTGGCAG
GACAAGGTGA ACAACAGCCC CATCGACAAG GAGGCCATGC GCATCCTGTT CGACAAGGTC
GGACGCGGGG CCGACGCCAT CTGGTTCGGC AACATCGAGG TGTACGGCAA ACAGCACCCC
GAATCCCTCG TCAGGATGAT GGATCGGTGG CAGGAAATCG TCACGTCCCA GACCGACCAG
CGCGGCTACT TCGAGGACAA CGGGGAGCTG TACTGCTACA CCATGCGTAT CTTTGCGGCT
TTGTGCGTCA TCATCGGCGT GTTCTGCTCG ATTATGTTCA TGGAGCTCAT CGAGCTGATC
GCCCTGTCCA TCGCGGCGGT GGTCCTGCTC GTGATCAGCT TCTTCATGCC GCGCCGCTCT
TGGGTCGCGG CGGAGATCTA CGGCCGATGC GAGGGCCTGC GCAACTGGCT GAAGGACTTC
AGCCTGCTCA ACGAGCGGCT TCCCACCGAC GTCAAGGTGT GGGGCGCCTT CATGGTGTAC
GCCTACGTTT TCGGGGTGGC GAAGCGCGCC ATGGAGCAGC TTCAGGTAAG CCTGCCGAAC
GTGGTTTCCG ACGCCGGTTT CGTGAGCACG TCCACATGGA TGGGGTATCG CAACGGCTAC
GTCGTGGGTC CGAACGCGGC GCCGGTCAGC CCCCTCGACA TGTTCTCGAC CATGTATTCC
AACACGGTGC GCACAGCCAA GGCGACCATC GCGGCGGCGG AGACCGGCAA CTTCATCGGC
GACGTCATGT CTAGCGGCGG CGGCGGTGGC GGCGGATTCT CCGGCGGCGG AGGCGGAGGC
TTCGGCGGCG GCGGTGGCGG CGCACGCTAA
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| Protein sequence | MRRNTSYTHL PKGRSLGRLQ VFSKSLLVLA VVMAAVLALF MFMRPAEAYA KEYTCPQTVM
NADVSDDGTL TVQENRTFDF DGSFTAIWWV FEQLGYDAQI VIDNAVVTND ATGESLDLDE
VPFQEYWREY GASDEPAWTW DAEQNTVYVF CPMADGTYTI TLEWHAENMA TLYADTGEVY
WQFVGGDWAI DSYDVTLNLQ LPVPDGETVT AGENVRVWGH GPLDATVHVD QTGLVTADVP
VVPSGEFAEV RATIPTEWLS GVAPGAYNDQ SGTEKMDEIL AEEQEWADKA NTQRIMAVSH
MAMGILASIG LIIWSIVMFF RHGREYRLPK DKYWRDLPAP GVHPAVISRL WSWNREDNND
FVATLMHLCN IGAIRIDPGT YQRKRKTVSD YYITRLDGWQ DKVNNSPIDK EAMRILFDKV
GRGADAIWFG NIEVYGKQHP ESLVRMMDRW QEIVTSQTDQ RGYFEDNGEL YCYTMRIFAA
LCVIIGVFCS IMFMELIELI ALSIAAVVLL VISFFMPRRS WVAAEIYGRC EGLRNWLKDF
SLLNERLPTD VKVWGAFMVY AYVFGVAKRA MEQLQVSLPN VVSDAGFVST STWMGYRNGY
VVGPNAAPVS PLDMFSTMYS NTVRTAKATI AAAETGNFIG DVMSSGGGGG GGFSGGGGGG
FGGGGGGAR
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