Gene Shel_27440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27440 
Symbol 
ID8396632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3037087 
End bp3037947 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID644987486 
Producthypothetical protein 
Protein accessionYP_003145091 
Protein GI257065419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.928344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGT ATGAACTGCC GGATTTCACG GCGAACCTTG GCTTGAACCT ATTTTTTGCG 
CGCCTCTTCA TGGAGCGCCC CGACTGGATG CAGGACGATG TGTGCATCGA TACGATGTAC
GGGTCCTTCC CCAATTGCAT CCTGAACGGA GGGCGCACCT ACCTGCGTGA ACGTTATACA
GAGCAGCAGA TTGACCGGAC CTTCGCCATT CTGGACGAAT ACGGCATCCG ACCGCGGCTC
ACCTTCACCA ACATGCTGGT GGACGAGGAA TCGCTGGCCG ACGGTTACGC GAACCTTATC
CTGCGCAAAG CCTCTCAGCA CGGCGGTCAG GTTATCGTCT ATTCCGACCT GGTCGCCGAT
TACGTGCGCG AGCGTTTCGA CATGCCCGTG ATCCTGTCCA CGACCCGGGA GATTCTGGAC
ATCGACGAGC TCAACCAGGC CCTGGACCAT TACGACTGGG TGGTGCTGAA CTACAACCTG
AACAAGCGAG ACGACGTGCT TTCCCAGGTC AAACACCCCG AAAAGCTGGA GGTCATGGTC
AACGAGTTCT GCATGCCCAA CTGCCCGCAT CGCCAGGACC ACTACCTGCA CAACAGCCGC
GGTCAGCTTA CCGGCGACCT TACGCCGTAC CCCTGCGTTG CGAACAAGCC GGATTTCTTC
CAACATCCCG AGGGGCATCC CACCATGTTC ACCGATACCG AGGTGCGCGC CTATGGCGAG
GATTACGGCA TCGAGTATTT CAAGATCGTC GGACGCGGCA CCGTATTCGA CACGCTGCTG
GAGTCCTTCT CCTATTACCT GGTGAAACCC GAGTACCGCC CGATTGTGAA ACGCGAAGTC
CAGCGCCTGC GCCAGAGATG A
 
Protein sequence
MIRYELPDFT ANLGLNLFFA RLFMERPDWM QDDVCIDTMY GSFPNCILNG GRTYLRERYT 
EQQIDRTFAI LDEYGIRPRL TFTNMLVDEE SLADGYANLI LRKASQHGGQ VIVYSDLVAD
YVRERFDMPV ILSTTREILD IDELNQALDH YDWVVLNYNL NKRDDVLSQV KHPEKLEVMV
NEFCMPNCPH RQDHYLHNSR GQLTGDLTPY PCVANKPDFF QHPEGHPTMF TDTEVRAYGE
DYGIEYFKIV GRGTVFDTLL ESFSYYLVKP EYRPIVKREV QRLRQR