Gene Shel_27420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27420 
Symbol 
ID8396630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3034899 
End bp3035810 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID644987484 
Product4Fe-4S protein 
Protein accessionYP_003145089 
Protein GI257065417 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GCAATACCGC TCGCATCAGG CTCTTCATCA TGTTGGCCTT TGTGGCTGTC 
GCCGCCGTCG GATATTTCGT CAAGGGCGGC ATCGGCAACT CCTGCGGCAT AGGATTCGAC
GACATCACTC TGATCTGCCC CTTGGGCGCC ATCCTTGTCA TGATTTCCGA ACGCACCGCC
ATTCCTCTAG CTGTCATGAG CGTCATGGCG GTCCTCATCA TGTGCATCGT CTTAGGCAAG
GTCTTCTGCT CGTGGCTATG CCCCGTGCAC TTCATGACCG AGCGACGAAT GCTCAGCAGA
AAGGCGAAAA AAGCTGCCAA GGAGGCCCGG CAAGCCGCAA GGGATACGGG CAATTCCGGC
ATCGACACGT CGCAGGTCAA GGCCTGCGGC AAGTCTTCTG GCGTGAAATT CGATTCGCGC
CATGCTGTGC TGGCGGCCGC CGTCGTCTCC ACCCTCATCT TCGGGTTCCC CGTGTTCTGC
CTGGTGTGCC CCGTAGGCAT CACCTTCGCT TTGGTGCTGC TGATCATGCG CCTGTTCGTG
TTCGGCGAGA CCACCTGGAC CATCATCTTG ATGCTTGCCG TGCTGGCGAT CGAAGTGGTA
GTGCTGCCGA ATTGGTGCCG TAACCTATGC CCCTTGGGCG CGTTGCACGG CCTGTTCAGC
GGTTTGAACA AGACCTTCAG GCCCGTTATC GATTCCGAAA CCTGCATCCA GGAAGGCCGC
GGTGGCCACT GCAACCTGTG CGTGGATGCC TGTCACGAGA ACATCAACCT GCATGACATC
AGCCGGGGCG AAACCACCCT GGCCGACTGC AGCAAATGCA GGGCGTGCGC CGACGCCTGC
CCGGTTTCGG CCATCACCTT CCCATTCCTG ACCAAAGACG CATCCATCGA GCCTGAAAAG
CACGACGCCT AG
 
Protein sequence
MNKRNTARIR LFIMLAFVAV AAVGYFVKGG IGNSCGIGFD DITLICPLGA ILVMISERTA 
IPLAVMSVMA VLIMCIVLGK VFCSWLCPVH FMTERRMLSR KAKKAAKEAR QAARDTGNSG
IDTSQVKACG KSSGVKFDSR HAVLAAAVVS TLIFGFPVFC LVCPVGITFA LVLLIMRLFV
FGETTWTIIL MLAVLAIEVV VLPNWCRNLC PLGALHGLFS GLNKTFRPVI DSETCIQEGR
GGHCNLCVDA CHENINLHDI SRGETTLADC SKCRACADAC PVSAITFPFL TKDASIEPEK
HDA