Gene Shel_27340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27340 
Symbol 
ID8396622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3024752 
End bp3025387 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content59% 
IMG OID644987476 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003145081 
Protein GI257065409 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGA TGTCTATCAT CACCGACGTA AACCGTTGCG TTGGCTGCCT GGCCTGCTCC 
GTTGCGTGCA AGGCTGTAAA CAACGTCCCT ATCGGCAACT TCTGGAACAA GGTCGTTCGC
GTGGGGCCGA ATCCCATTGA GGGAGGATCC GGCCAGTATC CGGACGTGTA CATGTACTTC
GTGACTGTCG GCTGCCAGCA CTGCGAAAAC CCCGAGTGCG TGAAGGTGTG CCCCACCGAG
GCGTCCCACA TCGCCGAGGA CGGCACGATT CAGATTGACA AGGCCAAATG CATCGGCTGC
CAGTTCTGCG TCATGGCCTG CCCCTACGGC GTTCGTTACC TCAACGAGGA AGAGCGCGTC
GTCGAGAAGT GCACCCTGTG CGAGCAGAAG CTCCAGCAGG GCGAGCTGCC TCAATGCGTG
TCCCAGTGCG GCGGCAACGC CCGCTGGATC GGCGACTTGG ACCAAGGCCT GGACAGCTTC
GTGGGTTCCT ACGACCCGCT GGGCGAACAG CGCAAGATGG TCGATTTCTT GGAAGATTTC
TCGGAGGAAG ACATCTATCA CCTGCCGGAC GTCGGCAACA AGCCCTCGTT TGCTTACATC
CTCCGTCGTC ACAAGTGGGA AGGCGGTGAC AACTAA
 
Protein sequence
MTRMSIITDV NRCVGCLACS VACKAVNNVP IGNFWNKVVR VGPNPIEGGS GQYPDVYMYF 
VTVGCQHCEN PECVKVCPTE ASHIAEDGTI QIDKAKCIGC QFCVMACPYG VRYLNEEERV
VEKCTLCEQK LQQGELPQCV SQCGGNARWI GDLDQGLDSF VGSYDPLGEQ RKMVDFLEDF
SEEDIYHLPD VGNKPSFAYI LRRHKWEGGD N