| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27320 |
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| Symbol | |
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| ID | 8396620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3020932 |
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| End bp | 3023598 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987474 |
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| Product | ABC-type antimicrobial peptide transport system, ATPase component |
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| Protein accession | YP_003145079 |
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| Protein GI | 257065407 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGAGC TCAAAAACAT TAAGAAAGAT TACGTGTCGG GCGACACCAC CGTCCAGGCG
CTCAAGGGCG TAAGCCTGCA GTTCCGGGAT TCGGAGTTTG TGGCCATCCT GGGCCAGTCC
GGCTGCGGCA AGACCACGCT GCTGAACATC ATCGGCGGCT TGGATCAGTA CACCTCGGGC
GACCTGGTCA TCAACGGCAC ATCAACCAAG AAGTACATGG ACCGCGATTG GGACTCGTAC
CGCAACCACA GCGTCGGCTT CGTGTTCCAG AGCTACAACC TCATCCCGCA CCAGACGGTG
CTGGCCAACG TCGAGTTGGC GCTCACGCTG TCGGGCGTTT CCCGCGGTGA GCGCAAGAAG
CGTGCCGAAC AGGCCCTGAT CGACGTGGGT TTGGGCGAGC AGATGCACAA ACGCCCCAAC
CAGCTGTCCG GCGGCCAGAT GCAGCGCGTG GCCATCGCCC GTGCCCTGGT GAACGATCCC
AGCATCGTGC TGGCCGACGA GCCCACCGGC GCCCTTGATA CCGAAACCAG CGTGCAGGTC
ATGGACATCC TTCGCCAGGT GGCAAAGGAC CGCCTGGTCA TCATGGTCAC CCACAACCCT
GAGCTGGCTG AAGAATACGC CGACCGCATC GTGGTGCTGC GCGACGGCGT CATCCAAAGC
GACACGGACC CCTATGAGAT TTCTGAAGAG GACCGCCGCC GCATCGAAGA CAACGCCCAG
TTCGGCTCGG GACGCACGTC CATGAGCATG CTGACCGCCT TCTCCCTTTC CGTCAACAAC
CTGCTCACCA AGAAGGGCCG CACCATTCTG ACGGCATTCG CCGGCTCCAT CGGCATCATC
GGCATCGCGC TGATTCTGTC GCTGTCCAGC GGTGCGCAGA ACTACATCAA CGAGCAGGAA
GAAGCCGCGA TGGGGCAGTA TCCCATCACC ATCCAGGAAA CGTCGATGAA CCTGGCGTCG
CTGATCGTGG GCATGTCGGG CGGTTCGAAT TCCGAGGAGG TGCAGCACGA GGAAGGCGTC
GTGCCTTCGT TCAATTTCGT GACCGACATG GTGACCAGCA TCGTGAACGA TGCGGACACC
AACGACATGG AATCTATCAA GTCGTGGCTG GAATCGAATC CCGACGACAT TCAGGATTAC
GTGACGGACA TCCAGTACTC GTACAAAACC CCTATCAATA TATATGCAGC CGACACCGAA
GACGGCTTGG TGCAGGTCAA CCCCGCAACC GTCATGGATT CGCTGGGCAT CAGCACCGCC
GGCAGCACGC AGAGCGCCAT GTTGAGCAGC ATGTCCGCTG TGGGCGGCGG CTACGACGTG
TGGCTTGAGA TGCTCGACAA CCCCGAAAGC TTCGAACGCG ACTTCACGCT GGTGGAAGGG
TCCATGCCCG AGGCGTGGAA CGAGGTCGTC ATCGTGCTTG ACGAATACGG CTCCATTTCC
GACTACACGC TGTATTCCCT CGGCCTGCTG GACCAGGCCG AGCTGAAAGA CCTGATGACC
GATGCCATCG CCGGCAAGAA GGTTAAGGAA TTCGAACAGA CCACCTACAC CTACGACGAA
CTGATGGCCC TGGAATTCAA GCTGCTGCCG CAGACCGCCT ACTACGAGAA GGGCGACGAC
GACACTTGGG TCGACCGTTC AGACGACGAT GATTTCGTTA TCGAACAGCT GGAAGACGCC
GAGGTCATCA AGGTGGTTGG CATCGTGCAG GCTACTGAGG ACAGTTCGTC CAACGCGGCC
CAGACCGGCG GCATCCTGTA CCGCCGCGAC CTGATGGAGC ACGCCATCCA GCTGGTTGAG
GATTCCGAGA TCGTCCAGGA GCAGAAGGCC AACGCCAACA ACGACGTGTT CACGGGCTAC
GCGTTTCCCG ATGACGACGA GGACGAACTC ACCATGGAGA GCATCGACGA GATGATTGCC
GAGATGCCTT CGGCCCAAGG CGATCAGGTT CGCGACTACA TTGACCAGCT GCGCGACGCC
GGCATGACCG ACGACGAGAT TGTCGATGCC TTCCAGAAAC AGATGGCCGC CAACACCGCC
GACGCCTCCT ACGAGGGCAA CCTTGAGAAG CTGGGTGTTT CCGACGTGGA CAGCCCCTTC
GCCATCAGCA TCTATCCGCG GGACTTCAAC TCCAAGGAGG TCGTGGACCA GATTATCGCC
GACTACAACG ACCGCATGGA GGCTTCGGGT GAAGACGACC AGGTCATCCA CTACACCGAC
ATCGTGGGCA CCCTCATGTC CAGCGTTACG AGCATCGTGA ACTCCATCAC CTACATTCTG
ATTGCGTTCG TAGCAATTTC CCTGGTCGTG AGCTCGATCA TGATCGGCAT CATCACCTAC
ATCAGCGTGC TTGAGCGCAC CAAGGAGATC GGCATCCTGC GCTCCATCGG CGCCTCGAAG
AAGGACATCT CCCGCGTGTT CAACGCCGAG ACCTTCATCA TCGGCCTGCT TGCCGGCCTG
CTCGGCGTCG GGCTGACGGT GCTGCTGGAC ATACCCGTCA ACATCATCAT CGAGCACGTT
TCCGGCGTGA AGGACATGGC GGCCGTCCCA GCCGGCGCCG GCGCTGCCCT GGTGGCGATT
TCGGTGCTGC TGACCCTCAT CGGCGGCATC ATCCCGTCTC GCATGGCGGC TAAGAAAGAT
CCGGTGACCG CGCTCAGGAC TGAATAG
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| Protein sequence | MLELKNIKKD YVSGDTTVQA LKGVSLQFRD SEFVAILGQS GCGKTTLLNI IGGLDQYTSG
DLVINGTSTK KYMDRDWDSY RNHSVGFVFQ SYNLIPHQTV LANVELALTL SGVSRGERKK
RAEQALIDVG LGEQMHKRPN QLSGGQMQRV AIARALVNDP SIVLADEPTG ALDTETSVQV
MDILRQVAKD RLVIMVTHNP ELAEEYADRI VVLRDGVIQS DTDPYEISEE DRRRIEDNAQ
FGSGRTSMSM LTAFSLSVNN LLTKKGRTIL TAFAGSIGII GIALILSLSS GAQNYINEQE
EAAMGQYPIT IQETSMNLAS LIVGMSGGSN SEEVQHEEGV VPSFNFVTDM VTSIVNDADT
NDMESIKSWL ESNPDDIQDY VTDIQYSYKT PINIYAADTE DGLVQVNPAT VMDSLGISTA
GSTQSAMLSS MSAVGGGYDV WLEMLDNPES FERDFTLVEG SMPEAWNEVV IVLDEYGSIS
DYTLYSLGLL DQAELKDLMT DAIAGKKVKE FEQTTYTYDE LMALEFKLLP QTAYYEKGDD
DTWVDRSDDD DFVIEQLEDA EVIKVVGIVQ ATEDSSSNAA QTGGILYRRD LMEHAIQLVE
DSEIVQEQKA NANNDVFTGY AFPDDDEDEL TMESIDEMIA EMPSAQGDQV RDYIDQLRDA
GMTDDEIVDA FQKQMAANTA DASYEGNLEK LGVSDVDSPF AISIYPRDFN SKEVVDQIIA
DYNDRMEASG EDDQVIHYTD IVGTLMSSVT SIVNSITYIL IAFVAISLVV SSIMIGIITY
ISVLERTKEI GILRSIGASK KDISRVFNAE TFIIGLLAGL LGVGLTVLLD IPVNIIIEHV
SGVKDMAAVP AGAGAALVAI SVLLTLIGGI IPSRMAAKKD PVTALRTE
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