Gene Shel_27240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27240 
Symbol 
ID8396612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3010538 
End bp3011347 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID644987466 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003145071 
Protein GI257065399 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA GCATGCATCA TGGTCATGTC GGCGGCTTGC GCGACGAACT CAATTTCCGG 
GAGCTGGGGG GTTACCGCAC GGCGGACGGA CGCACCGTGA AGCACGGCGT CTTCTACCGC
AGCGGAGCGT TGGGCGAAGC CACGCCCGAG GAGCTGGAAC GCATTTCCGA CCTGGGACTT
CGCTTTGTTT TGGACCTGCG CTGCCAAGAG GAGGCCGACG AGCTGCCCGA CCCCGTCATC
TCCGGCGCCG AACAGATCCG CATCAGCGGC TGCATGGACG CCGACGACAA CGAGGTGAAC
CTTTCGCCCA GTTCAATCTA CAAATTGCTC GTGAACCCGC GCCGCAAGGA CCCCGACCGG
GAGGAAAGCA TCGAGGCGGC CGTGGCCGAA ATCTACTCGT CGCTGGCCTT CGACAGCGTG
GCCTACCGTC GCCTGTTCGC CGAGATCGAA TCGGCCAACG TGCCGCTGCT GTTCCACTGC
ACGGCTGGCA AGGACCGCAC GGGCATCGCG GCCATGCTCA TCCTGATGGC GCTGGGCGTG
AGCGACCAGG ACATGATCGA CGACTTCGCG CTGACCAACG TGTACCGCCG CTCCCGCATC
GAGGCGAAGC TGGCCGACAA GCCGCTGCTT TCCAAGGTGG ACGTGGTGGA GAAGCTGATC
CGGGCCTCCG AAGGGGTCCT TCCCCACTTC GGGGAACGGG TCCTGAGCGA AATCCGCCAG
GAATACGGCT CTTACCAGGA GTTTCTGAAT AAGGAACTCG GGCTAGACGA GGAGCGCCTG
ACCGCGCTGC GCGACCGCTA TCTGGAGTAG
 
Protein sequence
MDTSMHHGHV GGLRDELNFR ELGGYRTADG RTVKHGVFYR SGALGEATPE ELERISDLGL 
RFVLDLRCQE EADELPDPVI SGAEQIRISG CMDADDNEVN LSPSSIYKLL VNPRRKDPDR
EESIEAAVAE IYSSLAFDSV AYRRLFAEIE SANVPLLFHC TAGKDRTGIA AMLILMALGV
SDQDMIDDFA LTNVYRRSRI EAKLADKPLL SKVDVVEKLI RASEGVLPHF GERVLSEIRQ
EYGSYQEFLN KELGLDEERL TALRDRYLE