Gene Shel_27210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27210 
Symbol 
ID8396609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3006794 
End bp3007852 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID644987463 
Productglycerol dehydrogenase-like oxidoreductase 
Protein accessionYP_003145068 
Protein GI257065396 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGG GCCGCTACCT GCAGGAGAAA GGGGTCATTA CCCTCCTAGG CTCCGAAGTG 
CTTCTGCTGG GTTCGAAAGC CTTCGTGCTT GGCGGCCCGT GCTCGTATCC TCTTGTTCGC
GATGCGGTGG AGAGTTCTTT CTCCGCCGCA TCGGCGGCTT TCGAGGCAGT CACCCACGAG
GCCCCGGCCA CGCGGGATGA CGCCCGAAGG CTGGCCGACC AGGCACTGGC CTGCGGCTGC
GACGTGATTG TGGGCATCGG CGGCGGACGC ATGATGGACG TCGCCAAAAC CGTGTCCTGC
AGCGCAGGGC TGCCCCTGAT CGAAGTGCCC ACAAGCATCG CGACCTGCGC GGCGTACACG
CCGCTTTCGG TCATGTACGA TGCCCAGGGC AAAGCCGACG GAGTCTGGCG CTTCACTCGC
GAAGTGGACG CCGTCATCGT CGACATGGAC ATCATGGCGA ACCAGCCGCC TCGGCTGATC
GCCGCCGGCG TGCTTGACGC CATGGCCAAG ATGCCCGAAA TCAGCAACGG CGGCACCGGG
CTTACCTGCG ACAACTCGCG GGTGGATCGT TTCGCCGCAT ACCAATACGC CTGCATCAAC
TACGACCTGC TGCACCGTTA CGGCACGCAG GCCTGCCAGG ATGCGGCCAA CGGCCAGGTG
ACCGAGGCGC TTGAGCGCAT CACCTTCGCG AACATGGCCC TGACCGGCAT CGTGAGCGCG
TTGACGCGAG GCTTCCATCA AACCGCCTTG GCGCATCGCT TCTACGACGG GATGCGCACG
TTCTTCGGCC AAGACTCCAA ACCGTGGCTG CACGGTGAGC TAGTGGCCAT CGGGCTGATC
ATGCAGTGCA CCTTCAACGG TGCGCCCGAT CAAGCCCAAG AGCTGCGGGA ATTCATGCGC
TCGATGGACA TGCCATGCTC CCTTGCGGAC ATCGGGTTCA GCGGCGACGA CCCGCGAACC
GCCCAGGTCC GCGACTACGT GGCGCATACT GAGTTCGTAG ACGACAGTCC GGAATGCCAG
GAGCGTTTCG CACAGTCGTT TGCCAAGATC ATTTCCTAG
 
Protein sequence
MGAGRYLQEK GVITLLGSEV LLLGSKAFVL GGPCSYPLVR DAVESSFSAA SAAFEAVTHE 
APATRDDARR LADQALACGC DVIVGIGGGR MMDVAKTVSC SAGLPLIEVP TSIATCAAYT
PLSVMYDAQG KADGVWRFTR EVDAVIVDMD IMANQPPRLI AAGVLDAMAK MPEISNGGTG
LTCDNSRVDR FAAYQYACIN YDLLHRYGTQ ACQDAANGQV TEALERITFA NMALTGIVSA
LTRGFHQTAL AHRFYDGMRT FFGQDSKPWL HGELVAIGLI MQCTFNGAPD QAQELREFMR
SMDMPCSLAD IGFSGDDPRT AQVRDYVAHT EFVDDSPECQ ERFAQSFAKI IS