Gene Shel_27190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27190 
Symbol 
ID8396607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3004850 
End bp3005980 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID644987461 
Producthypothetical protein 
Protein accessionYP_003145066 
Protein GI257065394 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA ACATGAGCCG CCGCAACTTC GTTGGAGTCG GTGCCGTCGC CGCTGCTAGC 
CTTATGCTGC CCGGCTGCGC CAGCGACGGT GGCGACACCA CCGAACAGGC CGCAGAAGAA
ACGGCCACCG AAGCCACGAC CGAAGAGGCC GCCTCTGAGG AGCCCAAGCC TCTGACCAAG
ATCCGCATGG CCTACGGCGG CGCCGGCCAC ATCACCACCG AGGTCGCCAT GGACCAGGGC
TACCTGGCCG AGGAAGGCGT CGAGGTCGAG TTCGTCCAGT TCGAGAACAA CGTCGACTGC
TTCGCCGGCG TCTTCTCCGA CAAGGTCGAC GTTCTGGCCA GCCAGGGCAC CAACATGCCG
CTGCAGCAGA TCGGCTCCGG CAACGAGCTG GTCATCTTCG GCCGCTACAT GATGCAGGGC
TGCATGCCCA TCGTCGCCAA GACCGGTACC AAGTGGAACG GCCCCGAGGA TCTTCTCGGC
AAAACCCTGG CCTCTTCCGG CAACGAATAT GCCGTCATGG GTCCGCTGCT GGATGCCGGC
CATGATCCGC TGAACGAGAT CAACCTCATG GTTCTGAACA ACCATGCCGA CCGCCTGGAA
GCCGTCCGCG CCGGTGAGGC CGACTACGCC ATCGTCGGCA CCTCCCAGAA CTACAACGTC
AGCCAGATGG ACGACCTGGA GGTCATGGCC TACGAGAGCG ACGTCACCCC GAACTACTCC
TGCTGCGTCG CCGACTGCAG CGCCGAGTTC CTGGCCAACA ACCGCGACGC CCTGAAGGGT
CTGCTGCGTG CTTGGCTGCG CGCCCTGTCC TTCTACAACC GCAACAAGGA CTACTGCATC
GAGCTGAACG CCAAGAACGT GAACTCCCCG AAGGAGTACA TCGAGATCTT CGCCAACAAC
GACCACTACA AGATGATGGT CGACCCGGGC CGCTCCGTTG TCGATCGCGC CTGGAACTGG
ATGGGCGAGC TGGGCTTCCT GGACGAGGGC TGGGAGAACA TCAACCTGGA CGACCACATC
GACATCTCCC TGTACGAAGA GGCACTGGAA GAAGTTACCG CAGCTCACGG CGACGAGGAC
CCCGAGTTCT ACGAGCAGTG CGCCAAGGAC TTCGCTGAAC TCAACGCATA A
 
Protein sequence
MKKNMSRRNF VGVGAVAAAS LMLPGCASDG GDTTEQAAEE TATEATTEEA ASEEPKPLTK 
IRMAYGGAGH ITTEVAMDQG YLAEEGVEVE FVQFENNVDC FAGVFSDKVD VLASQGTNMP
LQQIGSGNEL VIFGRYMMQG CMPIVAKTGT KWNGPEDLLG KTLASSGNEY AVMGPLLDAG
HDPLNEINLM VLNNHADRLE AVRAGEADYA IVGTSQNYNV SQMDDLEVMA YESDVTPNYS
CCVADCSAEF LANNRDALKG LLRAWLRALS FYNRNKDYCI ELNAKNVNSP KEYIEIFANN
DHYKMMVDPG RSVVDRAWNW MGELGFLDEG WENINLDDHI DISLYEEALE EVTAAHGDED
PEFYEQCAKD FAELNA