Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27190 |
Symbol | |
ID | 8396607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3004850 |
End bp | 3005980 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987461 |
Product | hypothetical protein |
Protein accession | YP_003145066 |
Protein GI | 257065394 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA ACATGAGCCG CCGCAACTTC GTTGGAGTCG GTGCCGTCGC CGCTGCTAGC CTTATGCTGC CCGGCTGCGC CAGCGACGGT GGCGACACCA CCGAACAGGC CGCAGAAGAA ACGGCCACCG AAGCCACGAC CGAAGAGGCC GCCTCTGAGG AGCCCAAGCC TCTGACCAAG ATCCGCATGG CCTACGGCGG CGCCGGCCAC ATCACCACCG AGGTCGCCAT GGACCAGGGC TACCTGGCCG AGGAAGGCGT CGAGGTCGAG TTCGTCCAGT TCGAGAACAA CGTCGACTGC TTCGCCGGCG TCTTCTCCGA CAAGGTCGAC GTTCTGGCCA GCCAGGGCAC CAACATGCCG CTGCAGCAGA TCGGCTCCGG CAACGAGCTG GTCATCTTCG GCCGCTACAT GATGCAGGGC TGCATGCCCA TCGTCGCCAA GACCGGTACC AAGTGGAACG GCCCCGAGGA TCTTCTCGGC AAAACCCTGG CCTCTTCCGG CAACGAATAT GCCGTCATGG GTCCGCTGCT GGATGCCGGC CATGATCCGC TGAACGAGAT CAACCTCATG GTTCTGAACA ACCATGCCGA CCGCCTGGAA GCCGTCCGCG CCGGTGAGGC CGACTACGCC ATCGTCGGCA CCTCCCAGAA CTACAACGTC AGCCAGATGG ACGACCTGGA GGTCATGGCC TACGAGAGCG ACGTCACCCC GAACTACTCC TGCTGCGTCG CCGACTGCAG CGCCGAGTTC CTGGCCAACA ACCGCGACGC CCTGAAGGGT CTGCTGCGTG CTTGGCTGCG CGCCCTGTCC TTCTACAACC GCAACAAGGA CTACTGCATC GAGCTGAACG CCAAGAACGT GAACTCCCCG AAGGAGTACA TCGAGATCTT CGCCAACAAC GACCACTACA AGATGATGGT CGACCCGGGC CGCTCCGTTG TCGATCGCGC CTGGAACTGG ATGGGCGAGC TGGGCTTCCT GGACGAGGGC TGGGAGAACA TCAACCTGGA CGACCACATC GACATCTCCC TGTACGAAGA GGCACTGGAA GAAGTTACCG CAGCTCACGG CGACGAGGAC CCCGAGTTCT ACGAGCAGTG CGCCAAGGAC TTCGCTGAAC TCAACGCATA A
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Protein sequence | MKKNMSRRNF VGVGAVAAAS LMLPGCASDG GDTTEQAAEE TATEATTEEA ASEEPKPLTK IRMAYGGAGH ITTEVAMDQG YLAEEGVEVE FVQFENNVDC FAGVFSDKVD VLASQGTNMP LQQIGSGNEL VIFGRYMMQG CMPIVAKTGT KWNGPEDLLG KTLASSGNEY AVMGPLLDAG HDPLNEINLM VLNNHADRLE AVRAGEADYA IVGTSQNYNV SQMDDLEVMA YESDVTPNYS CCVADCSAEF LANNRDALKG LLRAWLRALS FYNRNKDYCI ELNAKNVNSP KEYIEIFANN DHYKMMVDPG RSVVDRAWNW MGELGFLDEG WENINLDDHI DISLYEEALE EVTAAHGDED PEFYEQCAKD FAELNA
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