Gene Shel_27140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27140 
Symbol 
ID8396602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2999922 
End bp3000860 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content61% 
IMG OID644987456 
ProductABC-type tungstate transport system, permease component 
Protein accessionYP_003145061 
Protein GI257065389 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGCTTTCATC TAAGCTTCTG CTTGCTACCG TATTCGCAGC AGCGCTTGCA 
CTGTGCATGG TAGCTTGTTC CGGTGGTTCC GGCACCGCAA ACAGCGATGC CGAATCCACC
GACACGGCCG CAACGGAAGA AGCCGCCACG GAAGAAACGA CCGAGGAAGG AACCGCGCCT
GCCGCGCCTG AGAACCCGGT CATCCGCGTC TCCACCACCA CGTCGGTCAA CGACTCCGGC
CTGCTGCCGT ACCTGCAGCC CTACTTCGAA GAGGATACGG GCTATCAGCT GGAGGTCACT
TCCGCCGGTA CCGGTGCCGC CATCAAGAAG GGCGAGACGG GCGACGCCGA CGTGCTATTG
GTCCATGCCA AGGCGAGCGA AGAAGAGTTC GTCGAGGCTG GCTTCGGCGT CGAGCGCGTT
TCGTTCATGT ACAACTACTT CGTGATCGTC GGCCCCGCCG ATGATCCAGC AGGCGTCGCC
GACTGCGCAA CGGCCGCCGA CGCATTCGCT GCTATCGCCG ATTCCCAGTC CGCATTCGTC
TCCCGCGGCG ACGATTCCGG CACGAACAAG AAGGAACTCC AGATTTGGGA AGCCGCTGGC
ATCAACCCTG ACGGGCAAGA GTGGTACATC AACGCCGGTA GCGGCATGGG CGCAACGCTG
ACCCAGGCCA ACGAGCGCCA GGCTTACACC CTCTCCGACA AGGGCACCTT CCTGTCCAAC
GACGCTAGCG AATCCCTGCA GATTCTGCTG GGTGAATCCG ATGACATGAA GAACACCTAC
ACGATGATCG CCATCAGCCC CGAAGCCTGG CCCGACACCA ACATCGACGG CGCCAATGCC
TTCATCGAGT GGATGACCAG CGACAAGGCT CTCCAGCTCA TCGCCGAATA CGGCACCGAA
GAGTACGGCG AGCCTCTGTT CTACATCCTC GAGTCGTAA
 
Protein sequence
MKKLLSSKLL LATVFAAALA LCMVACSGGS GTANSDAEST DTAATEEAAT EETTEEGTAP 
AAPENPVIRV STTTSVNDSG LLPYLQPYFE EDTGYQLEVT SAGTGAAIKK GETGDADVLL
VHAKASEEEF VEAGFGVERV SFMYNYFVIV GPADDPAGVA DCATAADAFA AIADSQSAFV
SRGDDSGTNK KELQIWEAAG INPDGQEWYI NAGSGMGATL TQANERQAYT LSDKGTFLSN
DASESLQILL GESDDMKNTY TMIAISPEAW PDTNIDGANA FIEWMTSDKA LQLIAEYGTE
EYGEPLFYIL ES