Gene Shel_27100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27100 
Symbol 
ID8396598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2996505 
End bp2996987 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID644987452 
Productuncharacterized domain HDIG-containing protein 
Protein accessionYP_003145058 
Protein GI257065386 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG TGGAGGCCAT CCGGACACAT CCGCTCTACT GCAAGTGGTA TGCCCGTCTG 
AAAGACTGCG AAACCGACCG GGAATACTGC CGCCACGGCG CCGACCACCT TATCGGCGCG
GCGCGCATCG CCTACATCAT GGTGCTGGAG CAGGGGCTTC CCTATTCCAA AGAGCTGATT
TACGCCACGG CGCTGCTGCA CGACATCGGC AAGGCGGCGC AGTACGAATG CGGCGATCCC
CATGAGGTGG TGGGCGAAGG CATCGCGCGC CAGATTCTTT CGGATATCGA CGGGTTCACG
GATCAGGAGA AGGAGCAGAT CGTGCATGCG GTTCGGGAGC ATCGCCGCTA CGACAGGTCT
TCCTCCGAAC TGGGTCGCAT TCTGTATGCG GCCGATAAGG CGTCGCGCCT GTGCTTCGAC
TGCGATGCCA GGGGCACGTG CTCGTGGCCC GATGAGAAGA AGAACATGAA CGTGAGGATT
TAA
 
Protein sequence
MPEVEAIRTH PLYCKWYARL KDCETDREYC RHGADHLIGA ARIAYIMVLE QGLPYSKELI 
YATALLHDIG KAAQYECGDP HEVVGEGIAR QILSDIDGFT DQEKEQIVHA VREHRRYDRS
SSELGRILYA ADKASRLCFD CDARGTCSWP DEKKNMNVRI