Gene Shel_27020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27020 
Symbol 
ID8396590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2985143 
End bp2986879 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content66% 
IMG OID644987444 
Productprotein kinase family protein 
Protein accessionYP_003145050 
Protein GI257065378 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAATC TCATCTTGAA CAGATACCGT CCACTCGGTA CGGCCGGAAA GGGCGGCTAT 
GCCACCGTGC AGGTGGCGTG GGACACCCGC ATCCAGCGCC GCGTGGCCAT CAAATGCCTG
CGGCTGGACA ACATGCCCAT CGGTCTTGAC GTGCCCGAAT CCGAGATTCC GGGTCTGACC
GAGGCCCGCA CGGCCGCCAT GCTGAGCGAC CGTTCCATCG TGGGCGTGCT CGACTTCGAA
ATCGAAGGCG ACATGGCGTA TCTGATTATG GAATATGTGG ACGGCGTAAC GTTGACCGAG
CTCATGCAGC GCGAGGGGAT GCTGTCCGCC GACGTGTGCG CCTGCGTGTT CGGGGCGGTG
GCCCACGCGC TGGATTTCGC CCACGACAAC CTGGTGCTGC ACATGGACAT CAAGCCCGAC
AACGTGTTGA TCAACCGGCA GGGCGAAGTG AAGGTGTCCG ACTTCGGACT GGCGCAGCTG
TCCCACGAGG CGGGCTACGG CCGGGCGGTG GGCGGCACCA TCGGCTACAT GCCGCTGGAG
CAGATGCGGC TCGAGGCGCT GGACGAGCGC ACCGACGAGT GGGCCCTGGC GGCCATGACC
TACCAGATGC TGACCGGCGA CAACCCCTTT TACGCCAACG ACCTGGCAGC GGCCGAATCG
GCCATCGAGA ACGCGGAAAT CGTCATACCG TCGCAGGTCA GAAACGATTT TTCGGAAGAA
GCCGACGACG TGCTGTTCAA GGCGCTGGCC ATCGAGCGGG AAGGGCGCTA CGACTCCGTG
GAGGAGTTCG CCGCCGAGCT GCAGCCGCAT TTGGGCGATG CCCGCCGCGG ACGTCGCGAG
CTGGCGGTCA TCGTGGGCGA CGCACGGGAG GACTCGGGCA TCGGCGACAC CGCGGAGATG
CCGCCGTCGG ACATAACCTA CGTGGACCGC ATCGGCAGCC GGGGCTGGGA GTTTCTCGGG
CGCCTGGCCG CGGCGGTCGA ATGCGGGTTC ATCGGCGCGC TGTCGCTCAT GGGCATCGAC
CAGCTCCAGT CGCTGGGCGC GAACGCCACG GCGGTGTTCT GGGGCGTGCT GGCGGCCATG
GTTGTTTTGG GCGGAGCGCT GCCCACCATT GGTTCGCTGG CGGCGGTGGT TGTGATGGCA
ACGGCCTTGG TGCTGGCGGG CAATCCCGTG TTAGGCCTGG TCGTGGGCGT AGCGGGAGCG
GTGTGGTGGT TCTTGAGCGG GCGCTTCGGC ATGAAGGAGA CGTTCTGCGG GCTGGCCGCT
CCGCTGTTGG GCGGCATGTG GATTGCCTCG GCGGCTCCGC TTTTGGGCGG CTACCTGCTC
AGGTGGCGCG ACGCGCTGGC ATCGGCCGCG TTCGGAGGCG TGGTGTCTTT CGCGCTGGCC
TGCACGGGCT CGTCGACGCT GGCGGGCTGG GGCATGCTGG CCCATTCATT CATCACGTCG
GGCATGGACG ACAGCCTGCT GCACGTACTG ATGCGGCCTG AGATATGGCT GCTGTTCGTG
GCGTGGCTGG TGGCGGCCAT GGTCGTGTCC CTGTCGTGCA CGCGCGGGGT TCGCTGGCTG
GCATGCGCAG GCATGTTCGT CGGCGCGGCG CTCATTCTGG CGGCCATCCT GTGTGCCCAG
TTCATCTCCA GCGACGGTGC GACGGTCATT CCTATGCTGG TGGTGTTCAT CCCCAACATC
GTGGCGCTTT CGGGCATGGT GATCTTGACG CTGTTCGGCG TGCCGCAGCG CGATTAG
 
Protein sequence
MQNLILNRYR PLGTAGKGGY ATVQVAWDTR IQRRVAIKCL RLDNMPIGLD VPESEIPGLT 
EARTAAMLSD RSIVGVLDFE IEGDMAYLIM EYVDGVTLTE LMQREGMLSA DVCACVFGAV
AHALDFAHDN LVLHMDIKPD NVLINRQGEV KVSDFGLAQL SHEAGYGRAV GGTIGYMPLE
QMRLEALDER TDEWALAAMT YQMLTGDNPF YANDLAAAES AIENAEIVIP SQVRNDFSEE
ADDVLFKALA IEREGRYDSV EEFAAELQPH LGDARRGRRE LAVIVGDARE DSGIGDTAEM
PPSDITYVDR IGSRGWEFLG RLAAAVECGF IGALSLMGID QLQSLGANAT AVFWGVLAAM
VVLGGALPTI GSLAAVVVMA TALVLAGNPV LGLVVGVAGA VWWFLSGRFG MKETFCGLAA
PLLGGMWIAS AAPLLGGYLL RWRDALASAA FGGVVSFALA CTGSSTLAGW GMLAHSFITS
GMDDSLLHVL MRPEIWLLFV AWLVAAMVVS LSCTRGVRWL ACAGMFVGAA LILAAILCAQ
FISSDGATVI PMLVVFIPNI VALSGMVILT LFGVPQRD