Gene Shel_26970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26970 
Symbol 
ID8396585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2977526 
End bp2979079 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content60% 
IMG OID644987439 
Productanion transporter 
Protein accessionYP_003145045 
Protein GI257065373 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAC AGCATCAGCT TGGCAAGAAA ACCGAGGAAG CGGTATCCAA GCGAAATCAA 
GGGGGTAAGA AAAAGGGGGT AAACTGGATT ACATTGGCGG TGACGGTTCT CGTCGGCCTG
GTTCTGTGGT TCATCCCGGT TCCGGCAGGC TTGGTCGAGT TCGCCCAATC CGCTGAGGGC
TTCGAAGACA TCGATGGCGC GGTTCTAGCG GCGAACTGCT GGCACCTGTT CGCGATCTTC
GTGGCGACCA TCGTGGGTCT GATCCTCAAG CCCATGCCTA TGGGCGCGGT TTCCATTCTC
GCGCTCACGG TGATCATGCT TACGAAGCTT CTGGACAACG GAAGCTCCAG CGGCTACATC
ACCAACACGC TCTCTGGCTT CCACAACACG ACGATTTGGT TGATCGTCAT CGCGTTCTTC
ATTTCGCGCG GCTTCATCAA GACGGGTCTG GGCAATCGCA TCGCCTACCT GTTCATGAGC
AAGTTCGGCA AGAAGACGCT GGGCCTGAGC TACTCTCTGG CCGCAACCGA CCTGATTTTG
GCAACGGCCA TGCCGTCCAA CACGGCTCGC GCCGGCGGCG TGATCTACCC GATCGTTTCG
TCGCTGTCCC GCGTCTTCGG CTCCAACCCT GACGACGGCA CCGCCCGCAA GTTGGGTTCG
TACCTGCACG TCACGGCATT CCAGGCCGAC ATGATCACCT CCGCCATGTT CATGACCGCC
ATGGCCGCCA ACCCGTTGGC AGTCTCCCTC GCGGCTGAAC TGGCCGGCAT CAACATCGAC
TGGGCCGGTT GGGCCATCGC CGCATGCGTG CCCGGCCTCG TGTGCCTGAT CGTCGTTCCG
TTCGTCATCT TCAAGATCTT CCCGCCCGAG ATCAAGGAAA CGCCTGAAGC AAGCGACCTT
GCTCACGAGA AGCTGAAGGA AATGGGCCCG GTGAAGACCT CCGAGAAGCT CATGATCCTG
GTTTTCCTCG TCATCCTGGT TCTCTGGATC GCCGGCAGCT CCATCAGCCT GAACGCTACG
GTCACCGCGT TCATCGGTCT GGCCATGCTT CTGGTCCTGG GTGTTCTTAC CTGGGAAGAC
ATCAAGAACG AGAAGGCCGC TTGGGACACT CTGGTTTGGT TCGCCGCCCT GGTTATGATG
GCGTCCTACC TGAACACCCT GGGTCTCATC CCGTGGTTCT CCGACATCAT GGCCGGCGCC
GTCGGCGGCA TGTCCTGGCT CGTCGCGCTC ATCATTCTGG GTGTCGTGTA CTTCCTGTCC
CACTACCTGT TCGCATCCGC CACGGCTCAC GTGTCGGCAA TGTACTCCGC ATTCCTGGCT
GTCTGCCTCG CTGCAGGTGC GCCTCCTCTG GCTGCGGCCA TGCTGCTGGG CATGATCTCC
AACTTCTACG GTTGCCTGAC CCACTACGGT TCCGGCCCCG CACCGGTCTA CTTCGGCAGC
GGCTACGTGA CCCAGGGCAA GTGGTGGACT ATCGGTCTGG TCTGCGCTGT TATCGAAATG
ATCATCCTGT TCACGGTCGG TTTCGGCTGG TGGTCGGTCA TCGGCTACAT GTAA
 
Protein sequence
MVAQHQLGKK TEEAVSKRNQ GGKKKGVNWI TLAVTVLVGL VLWFIPVPAG LVEFAQSAEG 
FEDIDGAVLA ANCWHLFAIF VATIVGLILK PMPMGAVSIL ALTVIMLTKL LDNGSSSGYI
TNTLSGFHNT TIWLIVIAFF ISRGFIKTGL GNRIAYLFMS KFGKKTLGLS YSLAATDLIL
ATAMPSNTAR AGGVIYPIVS SLSRVFGSNP DDGTARKLGS YLHVTAFQAD MITSAMFMTA
MAANPLAVSL AAELAGINID WAGWAIAACV PGLVCLIVVP FVIFKIFPPE IKETPEASDL
AHEKLKEMGP VKTSEKLMIL VFLVILVLWI AGSSISLNAT VTAFIGLAML LVLGVLTWED
IKNEKAAWDT LVWFAALVMM ASYLNTLGLI PWFSDIMAGA VGGMSWLVAL IILGVVYFLS
HYLFASATAH VSAMYSAFLA VCLAAGAPPL AAAMLLGMIS NFYGCLTHYG SGPAPVYFGS
GYVTQGKWWT IGLVCAVIEM IILFTVGFGW WSVIGYM