| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26940 |
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| Symbol | |
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| ID | 8396582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2974262 |
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| End bp | 2975980 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644987436 |
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| Product | succinate dehydrogenase subunit A |
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| Protein accession | YP_003145042 |
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| Protein GI | 257065370 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.898505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGCT ATACATACGA TATCGTAGTT GTGGGCGCCG GCGGTGCCGG CATGGAAGCC
GCCCTCAACG CGAGCAAAGA CCCCGACCTG AGCGTTGCGG TCATCACCAA AGTGTTTCCG
ACCAGGTCCC ATACGGGCGC TGCCCAGGGC GGTATGAACG CCGCGCTGTG CTACCGCGAC
CCTGAGGACA CCATCGAAAG CCACATTTTC GACACCATCA AGGGTTCCGA CTACCTGGCC
GACCAGGATT CCGTCGAGTT CTTCTGCAAC GGCATGCCTG ACCTGGTCAG GGAGCTGGAG
TCCATGGGCG TTCCCTATTC CCGAGACGAG CAGGGCCGCG TTGCCCAGCG TCCCTTCGGC
GGCGCTTCGC ATCCGCGCTG CTGCTACGCG CAGGACAAGA CGGGCCATGT GGTTCTGCAT
GCCCTGTTCG AGAACTGCCT GAAGAACAAC GTCAAGTTCC TGGACGAGTA CAACCTGCTG
GACCTGGCCG TCGACGAGAG CGGCATCGAG GGCCTGGTGG CCATCGACCT GCGTGCCGGA
GAAATCGTCA TGTTCCGAGC CAAGTGCGTG GTGCTGGCCA CCGGCGGTTT CGGACGCGTG
TACTGGACCC GTACCACGAA CGCGACGAAC ATGACCGGCG ACGGCGTGGC TGCGGCCATG
CGCGTCGGCG TGCCCATCAA AGACCCTGAG ATGGTCCAGT TCCATCCCAC GGGACTTGCA
AGCTCCGGCA CCCTGCTTTC CGAGGCGTGC CGCGGCGAAG GCGGCTACCT GATCAACAAC
CAGGGCGAAC GCTTCATGGA GCGCTACGCC CCGGACAAGA TGGAGCTCGG CCCCCGCGAC
CTGGTGGCCC GTTCCATCGA GACCGAGATC AAGGAGGGTC GCGGCTTCGG CGAGGGCATG
AAGTCCTACG TCATGCTGGA CATGCGTCAT CTGGGCCGCG AGAAGATCAT GGAGCGTCTG
CCCCAGGTGC GTGACCTGGC CATCAAGTTC GAAGGCGTCG ACATGATCAC CGACCCGGTG
CCCATCCGCC CGTCCAACCA CTACAGCATG GGCGGCATCG ACGTCGTCAA CGGCAGGACC
TGCGCAACGA AGATTCCCGG CCTGTTCGCA GCCGGCGAAT GCAGCAACAT CTCCGTGCAC
GGCGCCAACC GTCTGGGCGG CAACTCCGTG TCCGAGGTGT GCTTCTTCGG CAAGCAGGCG
GGCATCGGTG CCGCTGCCGC CGCCAAGGGC CGCACTTTGG GCGGCTCCCA GAACCTCGAA
GAGACCGCGG CTGCCTGGCA GGAGCGTTTC GACACGATGC GCGCCAAGTC CAGCGGCAAG
CACATCTACG AGATCCGCGA CAAGATGGCC GAGGCCATGT GGAACGGCGT CGGCATCTTC
CGCGAGGGTC CGGCGATCGA AGAGGCCATG CGCGTTGTCG ACGAGTGCAT CGAGGAGTAC
AAGGACGCCC GCATCGACGA CACCAGCAAG GTGTACAACA ACGCTTTCAT GAACTACGTG
GAGCTGGGCA ACGTGCTCAC CATCGCGCGC GCCGTGTGCC TCGGCGCCCT CGAGCGCAAG
GAGAGCCGCG GATCCCACTC CCGCGGCGAC TATCCGACCC GCGACGACGT GAACTTCATG
AAGCACAGCC TCATCTCCCT CGAACCCGAC GGCAGCTACT CCATTGACTG GCGCGACGTA
GTTGTCACGA GCTACCAGCC GCAGGAGAGG AAGTACTAA
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| Protein sequence | MRSYTYDIVV VGAGGAGMEA ALNASKDPDL SVAVITKVFP TRSHTGAAQG GMNAALCYRD
PEDTIESHIF DTIKGSDYLA DQDSVEFFCN GMPDLVRELE SMGVPYSRDE QGRVAQRPFG
GASHPRCCYA QDKTGHVVLH ALFENCLKNN VKFLDEYNLL DLAVDESGIE GLVAIDLRAG
EIVMFRAKCV VLATGGFGRV YWTRTTNATN MTGDGVAAAM RVGVPIKDPE MVQFHPTGLA
SSGTLLSEAC RGEGGYLINN QGERFMERYA PDKMELGPRD LVARSIETEI KEGRGFGEGM
KSYVMLDMRH LGREKIMERL PQVRDLAIKF EGVDMITDPV PIRPSNHYSM GGIDVVNGRT
CATKIPGLFA AGECSNISVH GANRLGGNSV SEVCFFGKQA GIGAAAAAKG RTLGGSQNLE
ETAAAWQERF DTMRAKSSGK HIYEIRDKMA EAMWNGVGIF REGPAIEEAM RVVDECIEEY
KDARIDDTSK VYNNAFMNYV ELGNVLTIAR AVCLGALERK ESRGSHSRGD YPTRDDVNFM
KHSLISLEPD GSYSIDWRDV VVTSYQPQER KY
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