Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26870 |
Symbol | |
ID | 8396575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2966364 |
End bp | 2967941 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987429 |
Product | conserved hypothetical protein TIGR00299 |
Protein accession | YP_003145035 |
Protein GI | 257065363 |
COG category | [S] Function unknown |
COG ID | [COG1641] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.487711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATA TGCTGTATCT GGAATGCGCG TCGGGAATCT CCGGCGACAT GTTCGTGGGC GCGATGCTGG ATCTTGGCGC CGACCAGGCG AAACTCGAGG CTGCGCTGGC GAGTCTTCCC GTCGACGGGT ATAAGATCCG CATTTCCCGC GTGAAGAAGT CCGCACTTGA CGCCTGCGAT TTCGACGTGG TGCTGGATGC AGCCCACGAG AACCACGACC ACGACATGGA GTACCTGCAC GGGCACGACC ATGGGCACGA GCATCACCAC GGCCATGGGC ACGGACACGA CCATCACCAC GGCCACGACC ACTCGGACGA GCCCGAGCGC GTGTGCCGGA CCTGCGAAGG CCTATCGGAA TCTTCCGATT TCATGGCGCA GCTTGCCGCT GAGCAGGGGT ACAACGATCC CTGCGTTGTG CTGCACGGCC ACAGGGCGGG AACGCTCGAG CCTGCGGAGC CTTCGGATGT CGAGCATATG CATGTTGCCG CAGGTGAAGG GGATTACACC CTTTCGAGTC CTGAGCATCA CCACCACCAT TACGACCACG ATCACGAACA TGGCCATGGC CACCATCATC ACCACCACGA CCATGAGCAC CGCAGCCCTG CGGACATCGA CGCCATCATC GACACCGGTG ATCTGACCGA CAACGCGCGA GCCATCGCTA AGCGCATTTT CGCCATTATC GCCAAGGCAG AAGCCAAGGC CCATGGCGTG CCTGTCGACC AAGTTCATTT CCACGAGGTG GGCGCGGTGG ATTCCATCGT CGACGTCGTG GCTGCAGCCG TTTGCGTCGA CGACCTGGGC ATATCCGAAT GCGTGGTGCC TGCCCTACAC GAGGGCAAGG GCACCGTGCG CTGCCAGCAC GGCATCCTTC CCGTTCCCGT TCCCGCGGTT GCGAATATCG CCGCCGACGA GGGCCTGGCC TTCACGTTCA TGGATCTGGA GGGAGAGTTC GTCACGCCTA CGGGCGCCGC CATCGCCGCG GCCCTGCGCA CCCGCGATGC GCTGCCCGCG CGGTTCACCG TCGACAAGGT GGGCATCGGC GCCGGCAAGC GCACGTACGA GCAGCCGAGC ATCCTGCGGG CCATGCTGGT GCATGATGCG GGTGATCCGC AGGCCACGCT GGACAAGGAC ATGACGCCGC CGTTCATCTG GAAGCTCGAG ACCGAGATCG ACGACTGCTC AGGCGAGCAG CTGGCCTACG CCCTCGAACG CCTGCTGGCC AAGGGTGCGC TGGAGGCCCA CTATGCGCCC GTGTTCATGA AGAAGAACCG CCCGGCGTAC CAGATCGAGG TGCTCTGCCG CGAGGCGGAC ATCCCGAAAA TGGAGAATGT CCTGTTCAAG GAGACGACCA CTATTGGCAT CCGTCGCATT CCCATGGAGC GTACGCCGCT GCCGCGGACC CAGAAGACGG TCGCAACGCC TTACGGCGAC ATCCGCGTGA AAGAAGTTGC GCTGCCCGAC GGCACCCTGC GCGCCTACCC CGAATACGAC TCCGTCTCCG AAGCCGCCCG AACCCAAAAC GCTCCCTATC AGGACGTTTA CGCCGCAGCC TACACCGCTG CAAAGTAA
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Protein sequence | MSNMLYLECA SGISGDMFVG AMLDLGADQA KLEAALASLP VDGYKIRISR VKKSALDACD FDVVLDAAHE NHDHDMEYLH GHDHGHEHHH GHGHGHDHHH GHDHSDEPER VCRTCEGLSE SSDFMAQLAA EQGYNDPCVV LHGHRAGTLE PAEPSDVEHM HVAAGEGDYT LSSPEHHHHH YDHDHEHGHG HHHHHHDHEH RSPADIDAII DTGDLTDNAR AIAKRIFAII AKAEAKAHGV PVDQVHFHEV GAVDSIVDVV AAAVCVDDLG ISECVVPALH EGKGTVRCQH GILPVPVPAV ANIAADEGLA FTFMDLEGEF VTPTGAAIAA ALRTRDALPA RFTVDKVGIG AGKRTYEQPS ILRAMLVHDA GDPQATLDKD MTPPFIWKLE TEIDDCSGEQ LAYALERLLA KGALEAHYAP VFMKKNRPAY QIEVLCREAD IPKMENVLFK ETTTIGIRRI PMERTPLPRT QKTVATPYGD IRVKEVALPD GTLRAYPEYD SVSEAARTQN APYQDVYAAA YTAAK
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