Gene Shel_26870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26870 
Symbol 
ID8396575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2966364 
End bp2967941 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content63% 
IMG OID644987429 
Productconserved hypothetical protein TIGR00299 
Protein accessionYP_003145035 
Protein GI257065363 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.487711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATA TGCTGTATCT GGAATGCGCG TCGGGAATCT CCGGCGACAT GTTCGTGGGC 
GCGATGCTGG ATCTTGGCGC CGACCAGGCG AAACTCGAGG CTGCGCTGGC GAGTCTTCCC
GTCGACGGGT ATAAGATCCG CATTTCCCGC GTGAAGAAGT CCGCACTTGA CGCCTGCGAT
TTCGACGTGG TGCTGGATGC AGCCCACGAG AACCACGACC ACGACATGGA GTACCTGCAC
GGGCACGACC ATGGGCACGA GCATCACCAC GGCCATGGGC ACGGACACGA CCATCACCAC
GGCCACGACC ACTCGGACGA GCCCGAGCGC GTGTGCCGGA CCTGCGAAGG CCTATCGGAA
TCTTCCGATT TCATGGCGCA GCTTGCCGCT GAGCAGGGGT ACAACGATCC CTGCGTTGTG
CTGCACGGCC ACAGGGCGGG AACGCTCGAG CCTGCGGAGC CTTCGGATGT CGAGCATATG
CATGTTGCCG CAGGTGAAGG GGATTACACC CTTTCGAGTC CTGAGCATCA CCACCACCAT
TACGACCACG ATCACGAACA TGGCCATGGC CACCATCATC ACCACCACGA CCATGAGCAC
CGCAGCCCTG CGGACATCGA CGCCATCATC GACACCGGTG ATCTGACCGA CAACGCGCGA
GCCATCGCTA AGCGCATTTT CGCCATTATC GCCAAGGCAG AAGCCAAGGC CCATGGCGTG
CCTGTCGACC AAGTTCATTT CCACGAGGTG GGCGCGGTGG ATTCCATCGT CGACGTCGTG
GCTGCAGCCG TTTGCGTCGA CGACCTGGGC ATATCCGAAT GCGTGGTGCC TGCCCTACAC
GAGGGCAAGG GCACCGTGCG CTGCCAGCAC GGCATCCTTC CCGTTCCCGT TCCCGCGGTT
GCGAATATCG CCGCCGACGA GGGCCTGGCC TTCACGTTCA TGGATCTGGA GGGAGAGTTC
GTCACGCCTA CGGGCGCCGC CATCGCCGCG GCCCTGCGCA CCCGCGATGC GCTGCCCGCG
CGGTTCACCG TCGACAAGGT GGGCATCGGC GCCGGCAAGC GCACGTACGA GCAGCCGAGC
ATCCTGCGGG CCATGCTGGT GCATGATGCG GGTGATCCGC AGGCCACGCT GGACAAGGAC
ATGACGCCGC CGTTCATCTG GAAGCTCGAG ACCGAGATCG ACGACTGCTC AGGCGAGCAG
CTGGCCTACG CCCTCGAACG CCTGCTGGCC AAGGGTGCGC TGGAGGCCCA CTATGCGCCC
GTGTTCATGA AGAAGAACCG CCCGGCGTAC CAGATCGAGG TGCTCTGCCG CGAGGCGGAC
ATCCCGAAAA TGGAGAATGT CCTGTTCAAG GAGACGACCA CTATTGGCAT CCGTCGCATT
CCCATGGAGC GTACGCCGCT GCCGCGGACC CAGAAGACGG TCGCAACGCC TTACGGCGAC
ATCCGCGTGA AAGAAGTTGC GCTGCCCGAC GGCACCCTGC GCGCCTACCC CGAATACGAC
TCCGTCTCCG AAGCCGCCCG AACCCAAAAC GCTCCCTATC AGGACGTTTA CGCCGCAGCC
TACACCGCTG CAAAGTAA
 
Protein sequence
MSNMLYLECA SGISGDMFVG AMLDLGADQA KLEAALASLP VDGYKIRISR VKKSALDACD 
FDVVLDAAHE NHDHDMEYLH GHDHGHEHHH GHGHGHDHHH GHDHSDEPER VCRTCEGLSE
SSDFMAQLAA EQGYNDPCVV LHGHRAGTLE PAEPSDVEHM HVAAGEGDYT LSSPEHHHHH
YDHDHEHGHG HHHHHHDHEH RSPADIDAII DTGDLTDNAR AIAKRIFAII AKAEAKAHGV
PVDQVHFHEV GAVDSIVDVV AAAVCVDDLG ISECVVPALH EGKGTVRCQH GILPVPVPAV
ANIAADEGLA FTFMDLEGEF VTPTGAAIAA ALRTRDALPA RFTVDKVGIG AGKRTYEQPS
ILRAMLVHDA GDPQATLDKD MTPPFIWKLE TEIDDCSGEQ LAYALERLLA KGALEAHYAP
VFMKKNRPAY QIEVLCREAD IPKMENVLFK ETTTIGIRRI PMERTPLPRT QKTVATPYGD
IRVKEVALPD GTLRAYPEYD SVSEAARTQN APYQDVYAAA YTAAK