Gene Shel_26830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26830 
Symbol 
ID8396571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2962757 
End bp2963221 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content55% 
IMG OID644987425 
Producthypothetical protein 
Protein accessionYP_003145031 
Protein GI257065359 
COG category 
COG ID 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC AGAAGCTGCT CTTGGACACG AACATCATTG TGGACTTCCT GAACCGAAGG 
GAACCCTGGT TTGAGGACGC ACGGTTGCTC ATGATCTGCG GACGGGTGGG CGAATTCAGC
CTATGGATAT CATCGTCGCA GGTAACCGAC CTGGTTTACA TCGTGTCCCA AGGAGGTCGC
AAGGACCTTG TCCCCCAAAC CCTCGAACGG CTCCGATATC TTCGGACGTT CGTGAACGTG
GTTCCCGTGT CGGACGCCGA TGTCGATCGG ATACTTGCTA CGTCATGGTC CGACCCTGAA
GATGCGTTGC TCGTAGACCT GGCGCTTAAA ATCAGGGCTG ATGCCGTGAT CTCACGAGAC
GCAGTGCTGC GGGAAACGGA CTTGCTTCCC GCGTATGATT GCGGCGGGTT TTTCGACATG
CTAAGGCGCG ATTACGGGGT CGACTACGAC GAAATCTTGC AATAA
 
Protein sequence
MAKQKLLLDT NIIVDFLNRR EPWFEDARLL MICGRVGEFS LWISSSQVTD LVYIVSQGGR 
KDLVPQTLER LRYLRTFVNV VPVSDADVDR ILATSWSDPE DALLVDLALK IRADAVISRD
AVLRETDLLP AYDCGGFFDM LRRDYGVDYD EILQ