Gene Shel_26820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26820 
Symbol 
ID8396570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2962253 
End bp2962690 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID644987424 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_003145030 
Protein GI257065358 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGCA TTTATACCAC TGCGCTGATG GACCACCACG CCCATCCTGA TTATAAGTAC 
GAGATGGATG ACCCCACGCA TTCGCACGAG GGCATCAATC CCAGCTGCGG CGACGAAATG
GTTCTGTCGC TGCGCATCGA GGACGGCGTT ATCGAAGAGG CCGCCTTCAC CGGTCATGGC
TGCGCCGTGA GCCAGGCGTC CGCCGACATG ATGGCCGACC TGATCACCGG CGAAACCGTC
GAAGAGGCCC AGCGCTTGTG CGGGCTGTTC ATCGGCATGG TGCAGGGCAA GCCCCTGTCC
GAGCAGGATC GCGAGGACCT TGACGAAGCC GCCGAGCTGG AATCCATCGC CCGCATGCCT
GCCCGCGTGA AGTGCGCCGA GCTGGGCTGG CGAACCCTTG AGGGCATCCT GAACGACCCG
GAAGACTCCC GAGCCTAA
 
Protein sequence
MPSIYTTALM DHHAHPDYKY EMDDPTHSHE GINPSCGDEM VLSLRIEDGV IEEAAFTGHG 
CAVSQASADM MADLITGETV EEAQRLCGLF IGMVQGKPLS EQDREDLDEA AELESIARMP
ARVKCAELGW RTLEGILNDP EDSRA