Gene Shel_26790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26790 
Symbol 
ID8396567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2958375 
End bp2959784 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID644987421 
ProductIron-regulated ABC transporter membrane component SufB 
Protein accessionYP_003145027 
Protein GI257065355 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AAAGGACCGA GGTCGCCGAT ATCGACCGTT CGATGTACGA CTTCCGCTAC 
GGCGAAGAAG GCTTCGAGCG CGTCGCTGAA GGCCTGACCC CCGATATCGT TCGGGAAATC
TCCGAACGCA AGAACGAGCC CCAGTGGATG CTTGAGCATC GCCTGAAGTC GCTCGAGATC
TACAACCAGA TGCCGGTGTC CGATTGGGGC CCCGCCATCG ATGGCTTGGA CATGGATCAC
ATCGTCACCT ACGTCAAGCC CAACACCGAC CAGCGCGCCG ACTGGGACAG CGTACCCGAC
GACATCAAGA ACACCTTCGA GCGCCTGGGC ATCCCCGAGG CCGAACGCAC CTACCTGGCA
GGCGTCGGCG CCCAGTACGA CTCCGAGCTG GTCTACCACA GCATGCAGGA TGCGGCATCC
CAGATGGGCA TCGTCTACTC CGGCATCGAA GAAGCCCTGG ACGGCCCCTA CGCCGACCTC
ATCAAAGAGA AGTTCATGAC GCTGATTCCG CCCACCGACC ACAAGTTCGC GGCCCTGCAC
GGCGCCGTGT GGTCCGGCGG CTCCTTCGTC TACGTGCCTA AGGGCGTCAA GCTGGACTAC
CCGCTGCAGA GCTACTTCCG CCTGAACGCT TCCGGCGCCG GCCAGTTCGA ACATACGCTC
ATCATCGTCG AAGACGACGC CGACCTGCAC TTCATCGAAG GCTGCTCTGC CCCGAAGTAC
AACGTGGCCA ACCTGCACGC AGGCGCTGTG GAGCTGTTCA TTGGCAAAAA CGCACACCTT
CGCTACTCGA CCATCGAGAA CTGGTCGAAG AATATGTACA ACCTGAATAC CAAGCGCTCC
ATCTGCGACG AGGGCGGCTC CATCGAATGG ATCAGCGGCT CTTTCGGCAG CCACGTGGGT
TACCTCTACC CCATGTCCAT CCTGGCGGGC GCCCGCTCCA CCTCCACCTT CACCGGCATC
ACCTTCGCCG GCGCAGGCCA GAACCTGGAC ACGGGCTGCA AAGTCGTCAT GGCCGCGCCC
GACACCTCGG CAGCCGTCGA GACCAAGTCC ATCTCCAAGG ACGGCGGCGT TTCCACGTTC
CGCAGCTCCG TCGTGGCCAC CGAAAACGCC CACGGATCGG CCGCAACCGT CTCCTGCCAA
TCGCTCATGC TTGACGACAT CAGCCGTTCC GACACCATTC CCGCCATGGA CATCCGCTGC
AAGGACATCG ATGTGGGCCA CGAGGCAACC ATCGGCCGCA TCGGCGACGA AACCATCTTC
TACCTGATGA GCCGCGGAAT CCCCGAGGAA GAGGCCCGTA CCATGATCGT CAACGGCTTT
GCGGACCCCG TGTCCAAGGA GCTGCCGCTT GAGTACGCAG TCGAAATGAA CAACCTGATC
AAGCTCGAGA TGGAAGGAGC GATTGGTTAG
 
Protein sequence
MAKKRTEVAD IDRSMYDFRY GEEGFERVAE GLTPDIVREI SERKNEPQWM LEHRLKSLEI 
YNQMPVSDWG PAIDGLDMDH IVTYVKPNTD QRADWDSVPD DIKNTFERLG IPEAERTYLA
GVGAQYDSEL VYHSMQDAAS QMGIVYSGIE EALDGPYADL IKEKFMTLIP PTDHKFAALH
GAVWSGGSFV YVPKGVKLDY PLQSYFRLNA SGAGQFEHTL IIVEDDADLH FIEGCSAPKY
NVANLHAGAV ELFIGKNAHL RYSTIENWSK NMYNLNTKRS ICDEGGSIEW ISGSFGSHVG
YLYPMSILAG ARSTSTFTGI TFAGAGQNLD TGCKVVMAAP DTSAAVETKS ISKDGGVSTF
RSSVVATENA HGSAATVSCQ SLMLDDISRS DTIPAMDIRC KDIDVGHEAT IGRIGDETIF
YLMSRGIPEE EARTMIVNGF ADPVSKELPL EYAVEMNNLI KLEMEGAIG